Transcript Information: S_Transcript_7345.p1


Annotated TAIR IDAT5G41790.1
Annotated Gene NameCOP1-interactive protein 1
Annotated Gene Symbol(s)CIP1
Annotation TypeHomolog
Chromosome Positionchr5:16727530-16732391 | Forward length=1586
E-Value1E-55
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 123.47882546988
Replicate 230.267959227665
Replicate 328.007047564972
Condition 2: 8 Hour
Replicate 13.4367364560669
Replicate 23.143152288226
Replicate 33.1709525362782
Condition 3: 24 Hour
Replicate 131.187633247935
Replicate 230.717893376206
Replicate 333.507798662169


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_7345.p1 GENE.S_Transcript_7345~~S_Transcript_7345.p1 ORF type:complete len:484 (+),score=143.21,KIP1|PF07765.8|7.7e-11,KIP1|PF07765.8|1.2e+03,KIP1|PF07765.8|1.6e+02,KIP1|PF07765.8|2.4e+03,EzrA|PF06160.8|2.7e+02,EzrA|PF06160.8|19,EzrA|PF06160.8|2e-07,EzrA|PF06160.8|1.8,AAA_13|PF13166.2|0.051,AAA_13|PF13166.2|0.0005 S_Transcript_7345:187-1638(+)
ATGGGAAAGAGAAATCATCATGTGAGGAGGTCACTGAAGTCCTTTTTTCAGAAGCATGCTGATCCTGAGAAACATGAGAAGCTGAAAGAAAGCAGAAAAGATTTAGAGGAGAAGAAGAAAAAGATATTGAATCTTATGGAAAGCCATGATGAAAATGATGGAAACCAAATTCATGAATCAAAAAAAGGGCCAATCACGGAGCTCCTTGAGGAATTCCACAGACACTATGAATCACTTTTTTCTCACTATGATCATCTAGCCGGGGAACTCAAGGACAAAGTTGACAAACATCAGCTGAAGAAAGAGACGTTCTCTTCTGACTCAGACGTAGGCTCAGACTCCGAGCATGGTGATTCCACCAATGGCAAAGATGGAAATGTCGAGAATGATATTCTTCCGTCTGCAGCAATAGATGGGCTCCAGAAAGAGCTTGAAGCAGTGAACACAGAGGTGTCGGACCTCAAGAACAAGTTGGCAGCCATAAGCAATGAGAAAGCTACTCTTGAATCAGACTATATGACAATGTCAAGCAAGCTAGAGAATTCCGAAAGAAGTGTTGAAGAATTGAAGGTAGAAGCTGACAGATTAGTGGCAGAGAACGAAGAACTAAGAATGAGAGTAGAGATTGCAGCTAAGACAGAAATTGAACTGAATCAACAAATTGAAGAACTGAAAAAGGAGAGAGATGATCTAGTCATTGCAAATGAAGATGCCATGAAAAGGGTTGAAGACAGGAACCAAAGTGTTGAAAGCTTCAAAACCCAGGTTGATCAATTGCAGATTGAGAAGCAGAGCCTCGAGCTTGAACTGGGGACCATCAAGCAAAACGTTTGTGATCTGGAAGAGGAATTGAACTCAGCAAAAGAGGAAACAGAGAACTTGAGAAAGTGTTTGAAGAAAGCTGTTGAAGAGGAAGACAAGTATCAGGAGGAGTGCAAAATGTTAGAAGACAAGATCAGCAGACTTTCTCACTCACTTGCAGCTAACCATGAAGGATATCGTGAAATGATTATGAATATCTCAGAGAACGTAAACAATTTACTCACTCAAATGGAATCCATCATGACCAGCAAGTTTGAGGAGGACCACGGCAAGTTTTCTAACAACATTTTCAAGATATCCCAAGAGATTCAGGATGTAAAGCGTTGTTTAACAGGAAAGAATATCGAAAGAGAACAGCTGAAGAAGGAGCTAGGCGATGTAAATGAGAGTTTCAAGAAGCAACATCAAGAGATGGAGTTGTTGCAACGAGCAGTTGGCCAGCTGATGAAGGGGGTAGGAGAGCTGGATATGACATTGAAAGAGAAGGATGAGAGACTTTCAACCCTTGGAGAGGAGAAACGTCAGGCCATAAGGCACCTGTGCTTGTGGAGTGATAATCTCCAGAGTCGCTATGATGAACTAAAGAGCATTGTGTCAAAGGCAGCTTCACATAGGCGGCAGCATACATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_7345.p1 GENE.S_Transcript_7345~~S_Transcript_7345.p1 ORF type:complete len:484 (+),score=143.21,KIP1|PF07765.8|7.7e-11,KIP1|PF07765.8|1.2e+03,KIP1|PF07765.8|1.6e+02,KIP1|PF07765.8|2.4e+03,EzrA|PF06160.8|2.7e+02,EzrA|PF06160.8|19,EzrA|PF06160.8|2e-07,EzrA|PF06160.8|1.8,AAA_13|PF13166.2|0.051,AAA_13|PF13166.2|0.0005 S_Transcript_7345:187-1638(+)
MGKRNHHVRRSLKSFFQKHADPEKHEKLKESRKDLEEKKKKILNLMESHDENDGNQIHESKKGPITELLEEFHRHYESLFSHYDHLAGELKDKVDKHQLKKETFSSDSDVGSDSEHGDSTNGKDGNVENDILPSAAIDGLQKELEAVNTEVSDLKNKLAAISNEKATLESDYMTMSSKLENSERSVEELKVEADRLVAENEELRMRVEIAAKTEIELNQQIEELKKERDDLVIANEDAMKRVEDRNQSVESFKTQVDQLQIEKQSLELELGTIKQNVCDLEEELNSAKEETENLRKCLKKAVEEEDKYQEECKMLEDKISRLSHSLAANHEGYREMIMNISENVNNLLTQMESIMTSKFEEDHGKFSNNIFKISQEIQDVKRCLTGKNIEREQLKKELGDVNESFKKQHQEMELLQRAVGQLMKGVGELDMTLKEKDERLSTLGEEKRQAIRHLCLWSDNLQSRYDELKSIVSKAASHRRQHT*

Click here to download the sequence:
Link to NCBI Protein BLAST