Transcript Information: S_Transcript_73469.p3


Annotated TAIR IDAT3G22680.1
Annotated Gene NameRNA-DIRECTED DNA METHYLATION 1
Annotated Gene Symbol(s)RDM1
Annotation TypeOrtholog
Chromosome Positionchr3:8019785-8020374 | Forward length=163
E-Value1.7E-54
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.513337414755
Replicate 211.774442095461
Replicate 310.989195075721
Condition 2: 8 Hour
Replicate 114.364252545219
Replicate 215.069120845412
Replicate 312.369818299264
Condition 3: 24 Hour
Replicate 110.413105083599
Replicate 212.799769232238
Replicate 312.545680118607


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_73469.p3 GENE.S_Transcript_73469~~S_Transcript_73469.p3 ORF type:complete len:193 (+),score=28.34,DUF1950|PF09187.6|6.1e+03,DUF1950|PF09187.6|2.2e-58 S_Transcript_73469:3463-4041(+)
ATGAGATTACAGATTTATACCATGACGAAGAGGCCCATGCAATGGGATGGTCAGGTGGATGTTATTTCATCAGATGACGAATCAGCCAATGATGCAGATATTGACACAGATGCTGTATCTGGTCAACAGCAAACTGCTGAAGTTTTGATGAATCAACCTGCTGAAGTTTTGATTAGCCAGCCTGCTGACACAAAACCATCCGAAGGTTCCTTAATAAAGAGGGCGAAAATGTATCAGGAATACATGAAGAACGTCCAAATTCCATCCCAGCGTGGATCAGTCATTCCTTGTAATTCGTGGATGGGTTTAGCCAGATCAATTAAGGAGTTATATGGGCAACCTATGCACTATCTCACTAACATTCTTCTAAAACAATGGGACCAGGCAAGATTTGAGACTGGTGAGGAATACGAGCCATTGGATACCATCATACATCCTCTTAAAGCAGAAGCCACCATCTGGTTAATCGAGGAAGTTCATAGGCGCACAGCTTCATACCATCAATTAGCTAAATTATGGCTCCGAGATCCAATGCATCAGGCATTTATAGACCGAATTATCCCCAAAATTGGACATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_73469.p3 GENE.S_Transcript_73469~~S_Transcript_73469.p3 ORF type:complete len:193 (+),score=28.34,DUF1950|PF09187.6|6.1e+03,DUF1950|PF09187.6|2.2e-58 S_Transcript_73469:3463-4041(+)
MRLQIYTMTKRPMQWDGQVDVISSDDESANDADIDTDAVSGQQQTAEVLMNQPAEVLISQPADTKPSEGSLIKRAKMYQEYMKNVQIPSQRGSVIPCNSWMGLARSIKELYGQPMHYLTNILLKQWDQARFETGEEYEPLDTIIHPLKAEATIWLIEEVHRRTASYHQLAKLWLRDPMHQAFIDRIIPKIGH*

Click here to download the sequence:
Link to NCBI Protein BLAST