Transcript Information: S_Transcript_73472.p1


Annotated TAIR IDAT3G22680.1
Annotated Gene NameRNA-DIRECTED DNA METHYLATION 1
Annotated Gene Symbol(s)RDM1
Annotation TypeOrtholog
Chromosome Positionchr3:8019785-8020374 | Forward length=163
E-Value2.9E-44
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.8830751338112
Replicate 22.5739921150434
Replicate 32.3821867441317
Condition 2: 8 Hour
Replicate 13.1988085475699
Replicate 22.9829131519636
Replicate 32.3980328555604
Condition 3: 24 Hour
Replicate 12.3665290448144
Replicate 22.4552462541043
Replicate 32.5222044405116


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_73472.p1 GENE.S_Transcript_73472~~S_Transcript_73472.p1 ORF type:internal len:240 (+),score=32.61,DUF1950|PF09187.6|4.7e-47 S_Transcript_73472:1-717(+)
GAGCAAACGAACACTCGGCCATCAACCCCGAGGGTAACCCCTCTGCTCAGCTTAGCGACCACTGACCAGCAGTTAAAACTCAAAACCAAACTCAACAAGCAAGCAAAGCAACCAGTCCTTTGCCAATTGCCATTTGCCATCTCTCAGGAAGGTAGAGAAAGTGGCGACACCTCTTGTAACACTACATTGATACTCCAACATCTCCCAGTCTTCATTAGATTACAGATTTATACCATGACGAAGAGGCCCATGCAATGGGATGGTCAGGTGGATGTTATTTCATCAGATGACGAATCAGCCAATGATGCAGATATTGACACAGATGCTGTATCTGGTCAACAGCAAACTGCTGAAGTTTTGATGAATCAACCTGCTGAAGTTTTGATTAGCCAGCCTGCTGACACAAAACCATCCGAAGGTTCCTTAATAAAGAGGGCGAAAATGTATCAGGAATACATGAAGAACGTCCAAATTCCATCCCAGCGTGGATCAGTCATTCCTTGTAATTCGTGGATGGGTTTAGCCAGATCAATTAAGGAGTTATATGGGCAACCTATGCACTATCTCACTAACATTCTTCTAAAACAATGGGACCAGGCAAGATTTGAGACTGGTGAGGAATACGAGCCATTGGATACCATCATACATCCTCTTAAAGCAGAAGCCACCATCTGGTTAATCGAGGAAGTTCATAGGCGCACAGCTTCATACCATCAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_73472.p1 GENE.S_Transcript_73472~~S_Transcript_73472.p1 ORF type:internal len:240 (+),score=32.61,DUF1950|PF09187.6|4.7e-47 S_Transcript_73472:1-717(+)
EQTNTRPSTPRVTPLLSLATTDQQLKLKTKLNKQAKQPVLCQLPFAISQEGRESGDTSCNTTLILQHLPVFIRLQIYTMTKRPMQWDGQVDVISSDDESANDADIDTDAVSGQQQTAEVLMNQPAEVLISQPADTKPSEGSLIKRAKMYQEYMKNVQIPSQRGSVIPCNSWMGLARSIKELYGQPMHYLTNILLKQWDQARFETGEEYEPLDTIIHPLKAEATIWLIEEVHRRTASYHQ

Click here to download the sequence:
Link to NCBI Protein BLAST