Transcript Information: S_Transcript_73668.p1


Annotated TAIR IDAT5G28740.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:10780774-10783772 | Forward length=917
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.277927716372
Replicate 219.50224323367
Replicate 317.651076506085
Condition 2: 8 Hour
Replicate 120.274377439818
Replicate 222.371848639727
Replicate 320.468635855976
Condition 3: 24 Hour
Replicate 116.18396773707
Replicate 218.015748470864
Replicate 317.643401491655


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_73668.p1 GENE.S_Transcript_73668~~S_Transcript_73668.p1 ORF type:5prime_partial len:629 (+),score=165.63,TPR_14|PF13428.2|73,TPR_14|PF13428.2|63,TPR_14|PF13428.2|3.1,TPR_14|PF13428.2|20,TPR_14|PF13428.2|94,TPR_14|PF13428.2|0.79,TPR_14|PF13428.2|1.1e+02,Suf|PF05843.10|3.8,Suf|PF05843.10|0.00048,Suf|PF05843.10|0.51,TPR_12|PF13424.2|0.081,TPR_12|PF13424.2|0.085,TPR_12|PF13424.2|75,TPR_12|PF13424.2|9.4e+02,Mad3_BUB1_I|PF08311.8|8.4,Mad3_BUB1_I|PF08311.8|2.5e+02,Mad3_BUB1_I|PF08311.8|0.85,Mad3_BUB1_I|PF08311.8|1.8,Mad3_BUB1_I|PF08311.8|4.1e+02,TPR_16|PF13432.2|7.5e+03,TPR_16|PF13432.2|0.22,TPR_16|PF13432.2|99,TPR_16|PF13432.2|1.9,TPR_16|PF13432.2|6.9e+02,TPR_16|PF13432.2|1.4e+04 S_Transcript_73668:3-1889(+)
TTTAGTGTGATTTTCGATGCATACTCGCAGTTTGAGGAGAGTATGTTAGCTTTTAATATGGAGAATTTGAATTTGAGCGACGAGGAGGGGGTGGAGAATGGTGGGGTCGAGGATGGTGAGGAGGAGGAGGAGGATGTTAGGAAGGCTGTTGAGCTTTCGTTAGGGAAGTTCGAGAGGAAGATTCTTAAAGGGTTTTGGTTACATGATGATAATGATGTTGATTTGAGGTTAGCTAGGTTGGAGAATTTGATGGATAGACGGCCTGAGTTGGCGAATAGTGTGCTTTTACGACAGAACCCTCATAACGTTGAGCAATGGCATAGGAGGGTTAAGCTGTTTGAGGGTAATCCTACTAGGCAGATTTTGACTTATACTGAGGCTGTTAGGACTGTTGATCCAATGAAAGCTGTTGGAAAGCCTCATACCTTGTGGGTTGCTTTCGCTAAGCTATATGAGAATCATAAGGATCTTGCTAATGCTAGAGTGATCTTTGATAAAGCTGTGCAAGTGAATTATAAGAGTGTGGATCATTTGGCAAGTGTTTGGTGTGAGTGGGCCGAGATGGAGTTGAGGCATAAGAACTTTAGAGGAGCGTTGGACCTTATGAGGCGCGCTACGGCTGAGCCCTCTGTTGAAGTTAAGAGGAGAGTTGCTGCTGATGGTCATGAACCTGTACAGATGAAGCTACACAAATCATTAAGGTTATGGGCATTTTATGTGGATTTGGAAGAAAGCCTTGGTAATTTGGAGTCCACTCGTGCTGTGTATGAGAGGATTTTGGATCTGAGGATTGCCACTCCGCAAATCGTAACAAACTATGCAATGCTTTTGGAGGAACATAAATACTTTGAAGATGCTTTTAGGGTGTATGAAAGAGGTGTGAAGATCTTCAAATATCCACATGTAAAGGATATATGGGTTACTTATTTGTCCAAGTTTGTGAAGAGATATGGGAAGACTAAGCTAGAACGAGCAAGAGAGTTGTTTGAAAATGCTGTTGAAACGGCTCCAGCAGAGTGTGTAAAGCCTTTGTACTTGCAATATGCTAAGCTGGAGGAGGACTTTGGATTAGCAAAGCGAGCAATGAAGGTCTATGATCAAGCTACAAAAGCTGTTCCAGCTAGTGAGAAGTTAAGTATGTATGAGATCTACATAGCTCGCGCAACAGAAATATTCGGCGTGCCAAAAACCAGGGACATTTATGAACAAGCCATCCAATCTGGTCTCCCTGACAAAGATGTGAAGACCATGTGCATGAAGTATGCTGAGCTTGAAAAGAGCCTTGGAGAGATTGATCGTGCGCGTGCGATTTACACATATGCTTCCCAGTTTGCAGACCCGAGGACGGATCCTGATATCTGGAATCGATGGCATGACTTTGAGGTCCAGCATGGAAATGAAGACACATTCAGAGAAATGCTTCGCATCAAGAGAACTGTCTCAGCAAGTTTTAGCCAGACACAATTTATTCTTCCTCAGTATCTGATGCAAAACGATGAGAAGGTGAGTGTTGAGCAGGCTGTAGATACACTAAAACAAGCTGTTGGTTCAGAAGATGAAATGGCTGCTCTTGAAAAGAAGTTAGCTCCTGCAGACAACAATGTTCCAGATAAGGATAAACCTAGAACAGTTGGCTTTGTCAGTGCTGGGGTGGAATCGCGGGGTGATGATGGGAGGAGAAATGTAAATCAGGAAGAGATCGAACTGCCAGAGGATAGTGATGAGGAAGATGATGAGAAGGTTGAAATTAAACAGAAAGATGTGCCAAGTGCTGTTTTTGGTGGCTTAGCCCAGAAGCGCGATGAACCGGAAAAAGATGATCAGGACAAAGGAACAGATGCTCCTCTGGGTGCTTTAGAACGGTTGAAACGTCGGAAGAAAGGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_73668.p1 GENE.S_Transcript_73668~~S_Transcript_73668.p1 ORF type:5prime_partial len:629 (+),score=165.63,TPR_14|PF13428.2|73,TPR_14|PF13428.2|63,TPR_14|PF13428.2|3.1,TPR_14|PF13428.2|20,TPR_14|PF13428.2|94,TPR_14|PF13428.2|0.79,TPR_14|PF13428.2|1.1e+02,Suf|PF05843.10|3.8,Suf|PF05843.10|0.00048,Suf|PF05843.10|0.51,TPR_12|PF13424.2|0.081,TPR_12|PF13424.2|0.085,TPR_12|PF13424.2|75,TPR_12|PF13424.2|9.4e+02,Mad3_BUB1_I|PF08311.8|8.4,Mad3_BUB1_I|PF08311.8|2.5e+02,Mad3_BUB1_I|PF08311.8|0.85,Mad3_BUB1_I|PF08311.8|1.8,Mad3_BUB1_I|PF08311.8|4.1e+02,TPR_16|PF13432.2|7.5e+03,TPR_16|PF13432.2|0.22,TPR_16|PF13432.2|99,TPR_16|PF13432.2|1.9,TPR_16|PF13432.2|6.9e+02,TPR_16|PF13432.2|1.4e+04 S_Transcript_73668:3-1889(+)
FSVIFDAYSQFEESMLAFNMENLNLSDEEGVENGGVEDGEEEEEDVRKAVELSLGKFERKILKGFWLHDDNDVDLRLARLENLMDRRPELANSVLLRQNPHNVEQWHRRVKLFEGNPTRQILTYTEAVRTVDPMKAVGKPHTLWVAFAKLYENHKDLANARVIFDKAVQVNYKSVDHLASVWCEWAEMELRHKNFRGALDLMRRATAEPSVEVKRRVAADGHEPVQMKLHKSLRLWAFYVDLEESLGNLESTRAVYERILDLRIATPQIVTNYAMLLEEHKYFEDAFRVYERGVKIFKYPHVKDIWVTYLSKFVKRYGKTKLERARELFENAVETAPAECVKPLYLQYAKLEEDFGLAKRAMKVYDQATKAVPASEKLSMYEIYIARATEIFGVPKTRDIYEQAIQSGLPDKDVKTMCMKYAELEKSLGEIDRARAIYTYASQFADPRTDPDIWNRWHDFEVQHGNEDTFREMLRIKRTVSASFSQTQFILPQYLMQNDEKVSVEQAVDTLKQAVGSEDEMAALEKKLAPADNNVPDKDKPRTVGFVSAGVESRGDDGRRNVNQEEIELPEDSDEEDDEKVEIKQKDVPSAVFGGLAQKRDEPEKDDQDKGTDAPLGALERLKRRKKG*

Click here to download the sequence:
Link to NCBI Protein BLAST