Transcript Information: S_Transcript_7384.p1


Annotated TAIR IDAT1G44910.1
Annotated Gene Namepre-mRNA-processing protein 40A
Annotated Gene Symbol(s)ATPRP40A, PRP40A
Annotation TypeOrtholog
Chromosome Positionchr1:16975930-16982818 | Forward length=958
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 133.579493083938
Replicate 230.871285576711
Replicate 329.817493272639
Condition 2: 8 Hour
Replicate 137.831483387456
Replicate 241.45743702729
Replicate 339.560768012635
Condition 3: 24 Hour
Replicate 131.553720597525
Replicate 229.492832013665
Replicate 327.905745928448


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_7384.p1 GENE.S_Transcript_7384~~S_Transcript_7384.p1 ORF type:complete len:1062 (+),score=332.60,FF|PF01846.15|4e-13,FF|PF01846.15|2.2e-14,FF|PF01846.15|8.6e-08,FF|PF01846.15|0.00037,FF|PF01846.15|1.7e+03,FF|PF01846.15|2.4e-05,WW|PF00397.22|1e-11,WW|PF00397.22|3e-07,WW|PF00397.22|8.9e+03 S_Transcript_7384:170-3355(+)
ATGGCAAATAATCCTCCTCCATCTGCTCCACAGCTTCGACCACCTGCAATGGGTGCTCCTCAAAATTTCGGGCAGTTTCGGCCAATGGTCCAAGGACAGCAAGGGCAGCCATTTTTACCTGGATCTTCGCAACAGTTTCCGCCAGTTGGACAGAACATGCCTACAGGCCCTAACCAACCTATGCATCCTAACCAACCTATGCATCCTAATCAACCTATGCAGTACTCACAACCGATGCAGCAGTTACCTCCCAGGCCTGGGATGCCTGCTGTTGGTTTATCATCACAAGCTATGCCGCCAATGTCCTATGCTCAGCCAAACAGGCCTATTACGTCTGGTGCACAGCAGAATCATCCTGCCCCACCTTTTGGCAATCACATGTCCAGTGGAGGTGGCATGGGAATTCCTTTTTCTTCACCATATATGTTTCAACCAGCATCCCATATGCCTACTCCTGCTGCACCTGTTCCTGGACAACCTTGGTTATCATCTGGAAGTCAAGGCTCCACACCTTTTGCGCCAGTTCAGCAAACCGCAGACCAGTCTTCAGTTTCTTCTGCCGCTGTTCCTGCTGCCAATCCTCCTGAAACAAGTCAACAGTTGGCTTCAGATTGGCAAGAGCATGCTACTCCTGATGGAAGAAGATATTATTATAACAAGAAGACTAAGCAGTCCAGCTGGGAGAAGCCCTTGGAGTTGATGACTCCTGTAGAGAGAGCTGATGCATCAACTGTGTGGAAAGAATTTACTACCCCAGAAGGGAAAAAGTATTATTACAACAAGGTTACAAAGGAATCAAAATGGACAATACCTGAAGAGTTGAAGCTGGCTCGTGAACAAGCAGAAAAAGCTGCCAGTCAGGGATTACAGTCAGATGCTGGGATGCCATCCCTCTCCATCACTGCTGGAAGTGTGACTTCTGAGGAAGGACCTCCAACCGCGGCAGTTTTGGCTAGCTCCAATGGTTCAGCATCAGTGCCTGGCATAAGTTCAGCCCCATTAAGTTCTTCGGCTGTCAAGCCACAACCTATGGTTAATGCCTCATTGTCAGCCCCTTCTATGGGACATTCGGCTGGTCCAACCAATGTGACGGTAGCAACTTCGCCTGCAGTCACCGGTCCTGCTACCTCAGCATCTATTTCCGGTGATGCTAATGCTCCTGCTGCAGTTAACACCAGCTCAGCATTAATGAGTGCCTCAGATAGATTGCCTTCTCAAGATATCTCAACTTCTGTGGATGGAACTTCTGTGCAGGACCTTGAGGAGGCACGGAAAGGGATGGCAGCTGCAGGGAAAGTAAATGTCAGTGAGTTGGAGGAGAAAACAACAGATGATGAACCTCTGGTTTTTGCCAATAAGCAGGAAGCTAAAAATGCATTCAAATCACTTTTGGAGTTCGCGAATGTTCAGGCTGATTGGACTTGGGATCAGGCAATGAGGGTAATAGTCAATGATAAAAGATACGGTGCTCTAAAGACATTGGGAGAGCGCAAACAAGCATTTAATGAGTACTTGGGGCAACGAAGAAAGCAAGAAGCTGAGGGGCGACGCATGAGGCAGAAAAAAGCAAAGGAAGAATTCACGAAAATGTTAGAAGAGTCAAAGGAACTCACGTCATCTGTGAAATGGAGTAAAGCTATTACTATGTTTGAAGATGATGAAAGATTTAAGGCTGTTGAAAAGCCCAAAGATCGGCAAGAGCTGTTTGAGAATTACTTGGTGGAACTCCAGAAAAAGGAGAAGGAAAAGGCTGAAGAAGAGTATAGGCAGAACAGAGAAGAATACTGGAAGTTCCTGGAATCATGCGACTTCATTGAGGTGAACAGTCTATGGAGAAAAGTTCAGGACCGCTTGGAAGATGATGAAAGATGTTCGCGACTAGAAAAGATTGACCGCTTGGAAATTTTCCAGGATTACATTCGTTACTTGGAGAAGGAGGAAGAGGAGCAGAAGAAGATGCAAAAGGAACAATTACGGAGGGCAGAGCGAAAGAATCGTGATGAATTTCGCAGTATGATGGATAGTGATGTTGCAGCGGGCGTTCTCACTGCTAAAACATGCTGGCGTGAATATTGCGAAAAGGTCAAAGAATCTTCTGCGTATCTTGCTGTGGCACGTAATACATCTGGGTCGACACCCAAAGATTTGTTTGAGGATGTAGTTGACGAACTGGAGAATCAGTATCATGATGAGAAAAGTCGAATAAAAGATGCAGTGAAGTTGTCTAAGATTTCTATGACATCAACGTGGACATTTGAAGAATTTAAGGAATCTATTTTATCCGAGCTTGGGTCTCCACCAATATCAGATATTAATATGAAGCTGGTGTTTGAAGAGCAGCTTGAGAGGGTAAAGGAGAAGGAAGAGAAAGAAGCTAAAAAGCGCCAGCGTCTTGTGGATGACTTCACAGATTTATTGCGCTCCCTCAAGGAAATAAATGCATCTTCTACCTGGGAAGACTGCAGAGGACTGTTTGATGATAGTGACGAGTACAGAGAAATTGGGGAAGATTTAGCAAAGGATACCTTTGAGGATTATGTTGTTCACCTGCAAGAGAAGGCAAAAGAGAAGGAACGCAAGCGTGAGGAGGAAAAGGCGAGGAAGGAGAAAGAAAGAGAGGAGAGAGAGAAGAGGAAGGAGAAGGAGAAGGAGAGAAAGGAAAAAGACAGAGACCGTGATAGAGAAAAACGAAAAGAAAGGTCCAAGAAGGAGGAATCTGATGATGAAACTATGGATGCAACTGATAGCCATGGTTACAAGGATGATAATAGAAAGGACAAGGAAAAAGACAAGGATCGGAAGCACAGGAAGAGGCACCATGATGCTGCCGATGATGCGAGTTCTGACAGGGATGATGACAAAGATAGGCGTCATCGGAAGCGACACCATGACACAGCTGATGATTTCAGTTCTGACAGGGATGATGACAGGGAAAGGCGTCACAGGAAACGGCACCATGATAACGCTGATGATGTCAGTTCTGATAGGGATGACAAGGAAGAGCACAAGAAATCTCGACGGCATGGTAGTGACAGAAAGAAATCTAGGAAGCATGAATATTCACCTGATTCGGATGGTGAAAGTAGGCATAAAAGACACAAGAGGGATCACCGCGATGGTCGAAGAAATAGCACCCATGATGAACTTGAAGACGGTGAGCTAGGTGAGGATGGTGAAATCCAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_7384.p1 GENE.S_Transcript_7384~~S_Transcript_7384.p1 ORF type:complete len:1062 (+),score=332.60,FF|PF01846.15|4e-13,FF|PF01846.15|2.2e-14,FF|PF01846.15|8.6e-08,FF|PF01846.15|0.00037,FF|PF01846.15|1.7e+03,FF|PF01846.15|2.4e-05,WW|PF00397.22|1e-11,WW|PF00397.22|3e-07,WW|PF00397.22|8.9e+03 S_Transcript_7384:170-3355(+)
MANNPPPSAPQLRPPAMGAPQNFGQFRPMVQGQQGQPFLPGSSQQFPPVGQNMPTGPNQPMHPNQPMHPNQPMQYSQPMQQLPPRPGMPAVGLSSQAMPPMSYAQPNRPITSGAQQNHPAPPFGNHMSSGGGMGIPFSSPYMFQPASHMPTPAAPVPGQPWLSSGSQGSTPFAPVQQTADQSSVSSAAVPAANPPETSQQLASDWQEHATPDGRRYYYNKKTKQSSWEKPLELMTPVERADASTVWKEFTTPEGKKYYYNKVTKESKWTIPEELKLAREQAEKAASQGLQSDAGMPSLSITAGSVTSEEGPPTAAVLASSNGSASVPGISSAPLSSSAVKPQPMVNASLSAPSMGHSAGPTNVTVATSPAVTGPATSASISGDANAPAAVNTSSALMSASDRLPSQDISTSVDGTSVQDLEEARKGMAAAGKVNVSELEEKTTDDEPLVFANKQEAKNAFKSLLEFANVQADWTWDQAMRVIVNDKRYGALKTLGERKQAFNEYLGQRRKQEAEGRRMRQKKAKEEFTKMLEESKELTSSVKWSKAITMFEDDERFKAVEKPKDRQELFENYLVELQKKEKEKAEEEYRQNREEYWKFLESCDFIEVNSLWRKVQDRLEDDERCSRLEKIDRLEIFQDYIRYLEKEEEEQKKMQKEQLRRAERKNRDEFRSMMDSDVAAGVLTAKTCWREYCEKVKESSAYLAVARNTSGSTPKDLFEDVVDELENQYHDEKSRIKDAVKLSKISMTSTWTFEEFKESILSELGSPPISDINMKLVFEEQLERVKEKEEKEAKKRQRLVDDFTDLLRSLKEINASSTWEDCRGLFDDSDEYREIGEDLAKDTFEDYVVHLQEKAKEKERKREEEKARKEKEREEREKRKEKEKERKEKDRDRDREKRKERSKKEESDDETMDATDSHGYKDDNRKDKEKDKDRKHRKRHHDAADDASSDRDDDKDRRHRKRHHDTADDFSSDRDDDRERRHRKRHHDNADDVSSDRDDKEEHKKSRRHGSDRKKSRKHEYSPDSDGESRHKRHKRDHRDGRRNSTHDELEDGELGEDGEIQ*

Click here to download the sequence:
Link to NCBI Protein BLAST