Transcript Information: S_Transcript_73889.p1


Annotated TAIR IDAT3G04760.1
Annotated Gene NamePentatricopeptide repeat (PPR-like) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:1303884-1305692 | Reverse length=602
E-Value4.7E-253
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 186.423663804968
Replicate 2105.68910186658
Replicate 3128.97239838532
Condition 2: 8 Hour
Replicate 113.667303416307
Replicate 212.185353984181
Replicate 312.122930510737
Condition 3: 24 Hour
Replicate 1170.51770738448
Replicate 2140.57793778456
Replicate 3152.11232965972


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_73889.p1 GENE.S_Transcript_73889~~S_Transcript_73889.p1 ORF type:complete len:582 (+),score=86.88,PPR_2|PF13041.2|0.013,PPR_2|PF13041.2|0.0086,PPR_2|PF13041.2|9.4e-20,PPR_2|PF13041.2|6.2e-15,PPR_2|PF13041.2|3.7e-15,PPR_2|PF13041.2|1.1e-10,PPR_2|PF13041.2|1.4e-15,PPR_2|PF13041.2|2.1e-11,PPR_2|PF13041.2|2.2e-05,PPR_2|PF13041.2|3.6e-14,PPR_2|PF13041.2|3.8e-13,PPR_2|PF13041.2|5e-14,PPR_2|PF13041.2|3.5e-15,PPR_1|PF12854.3|2.2e+02,PPR_1|PF12854.3|0.0052,PPR_1|PF12854.3|2.7e-09,PPR_1|PF12854.3|6.1e-11,PPR_1|PF12854.3|2.4e-05,PPR_1|PF12854.3|1e-07,PPR_1|PF12854.3|1.5e-05,PPR_1|PF12854.3|1.9e-11,PPR_1|PF12854.3|2.6e-08,PPR_1|PF12854.3|5.1e-09,PPR_1|PF12854.3|0.00028,PPR_1|PF12854.3|4.2e-11,PPR_1|PF12854.3|2.2e-09,PPR_1|PF12854.3|0.039,PPR|PF01535.16|21,PPR|PF01535.16|2.2,PPR|PF01535.16|5.2e-08,PPR|PF01535.16|3.1e-06,PPR|PF01535.16|0.00011,PPR|PF01535.16|0.0012,PPR|PF01535.16|0.00013,PPR|PF01535.16|9.7e-07,PPR|PF01535.16|8.9e-06,PPR|PF01535.16|1.3e-05,PPR|PF01535.16|0.018,PPR|PF01535.16|6e-07,PPR|PF01535.16|2.6e-05,PPR|PF01535.16|42,PPR_3|PF13812.2|5e+02,PPR_3|PF13812.2|33,PPR_3|PF13812.2|0.0087,PPR_3|PF13812.2|0.0052,PPR_3|PF13812.2|1.3,PPR_3|PF13812.2|9.8,PPR_3|PF13812.2|0.00022,PPR_3|PF13812.2|0.002,PPR_3|PF13812.2|0.01,PPR_3|PF13812.2|0.024,PPR_3|PF13812.2|0.019,PPR_3|PF13812.2|0.00049,PPR_3|PF13812.2|0.0014,TPR_14|PF13428.2|9.8e+03,TPR_14|PF13428.2|1.3e+03,TPR_14|PF13428.2|1.9e+03,TPR_14|PF13428.2|11,TPR_14|PF13428.2|1.3e+02,TPR_14|PF13428.2|6.6e+03,TPR_14|PF13428.2|6.3e+03,TPR_14|PF13428.2|11,TPR_14|PF13428.2|3.7e+02,MRP-S27|PF10037.5|3.8e+02,MRP-S27|PF10037.5|4.2,MRP-S27|PF10037.5|0.52,MRP-S27|PF10037.5|0.84 S_Transcript_73889:212-1957(+)
ATGACAATATACTCTACTGAACTATTCCCTCATTGCCTTCCCTACATTTCTGAGCTCAGAGTCCCTCCTTCCTTGAATTCATACCATATCTGCCCCATAACCTGCAGAAAAACCATCTCACATGAGATCCACACGAGAACTTTTCCAAGACTCGAGGCTTATTCACCAGCGACTAAGTCGACCCTTTTGCAGCCAGTTGATTTCAAAGAGACCCAGTTGGTGAAACTCATCAAAAAGTCCTATAAAACTGGGAATTTGAATGAAGCCTTGTATTTCCTGCACTGTATGGCGAGCAGAGGATACAAACCTGATGTCGTCCTGTGTACGAAGCTCATCAAGGGATTCTTCAACATGAAAGATGTCAGTAAAGCAATTGAGGTGATGGAGATTTTGGAATCAAAAGGTGAGCCAGATGTGTTTGCATACAATGCCATGATCAATGGTCTTTGCAAGGTAAATAAAATTGAACATGCTAATGAACTGCTTAACAGGATGAAGGCTAGAGGGTTTTCCCCTGATATAGTTACCTATAATATCATGATTGGCAGTCTATGTAGCAGGGGAAAACTTAATTCGGCGTTGAGGTTGCTAGACAAGTTACTGAAAGATAACTGTCAGCCAACTGTTGTTACTTACACTATCTTAATCGAAGCTACTATCGTCGAAGGTGGGATCAAAGAAGCAACAAAGTTATTCAATGAGATGCTAGAAAGAGGGCTTGAGCCTGACATGTATGTCTACAACACTATGATTAGGGGGATGTGCAAAGAGGGGTTAGCAAATCAGGCACTCACCTTTGTTCGGAGCCTGCCCCTGAACGGCTGTCACCCTGACGTGATCTCGTACAACATCCTCTTACGAGCACTGCTAGACCAAGGGAAATGGGCGGAAGGGGAGCAGCTAGTAAGAGAGATGCTTTCGAGAGGCTGTGAGCCGAATCTTGTTACTCACAGCATACTGATCACTGCATTATGTCGTGAAGGAAAGGTCGAGGAGGCTCTGAATATGCTCAAAGTTATGCTAGAGCAGGGTCTGAAACCAGATAACTATAGCTATGATCCATTGATTTCGGCATTTTGTAAAGAGGGAAAGCTAGACTTAGCTATTGGGATCTTAGACCTTATGATATCAAATGGTTGCTTGCCTGATATTGTCAATTACAACACTGTTCTGGCTGCTCTCTGCAAGAATGGCAAGGCTGATCAAGCACTGGAGATTTTTCATAAGCTTGGTGAGGTGGGTTGCAATCCTGATGTGAGCTCCTACAACTGCTTGATAAGTGCGTTGTGGAATAGTGGGGAGCGATCAAGGGCTATGAGAATGGTCGAAGGAATGATTAACAAAGGGATTGATCCTGATGAGATCACTTACAATGCCCTTTTGTCCTGTTTGTGCAGAGATAGGATGGTTGATGAGGCCATGGAATTACTGCAGGCAATGGACAAGTTTAGTGTAAAACCAACTGTTATTAGCTACAATATGATAGTACTCGGTCTTTGCAAAGAACATCGGATGAGCGATGCTGTTGAATTGCTAGGGCAAATGGTTGAAAAGGGTTGTCAACCTAATGAAACTACTTACACTTTATTGATTGAAGGGATAGGATTTGCAGGCTGGCGTATTGAGGCTATGGAATTGGCAAATTCTCTAGCAGAAATGGGTGCTATTTCCCCGGATTCTTTTAGACGCTTGAGTAAGACCTTCCCTATTCATGTACAGAGAGAACTTGCAGCTTCTGGAATCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_73889.p1 GENE.S_Transcript_73889~~S_Transcript_73889.p1 ORF type:complete len:582 (+),score=86.88,PPR_2|PF13041.2|0.013,PPR_2|PF13041.2|0.0086,PPR_2|PF13041.2|9.4e-20,PPR_2|PF13041.2|6.2e-15,PPR_2|PF13041.2|3.7e-15,PPR_2|PF13041.2|1.1e-10,PPR_2|PF13041.2|1.4e-15,PPR_2|PF13041.2|2.1e-11,PPR_2|PF13041.2|2.2e-05,PPR_2|PF13041.2|3.6e-14,PPR_2|PF13041.2|3.8e-13,PPR_2|PF13041.2|5e-14,PPR_2|PF13041.2|3.5e-15,PPR_1|PF12854.3|2.2e+02,PPR_1|PF12854.3|0.0052,PPR_1|PF12854.3|2.7e-09,PPR_1|PF12854.3|6.1e-11,PPR_1|PF12854.3|2.4e-05,PPR_1|PF12854.3|1e-07,PPR_1|PF12854.3|1.5e-05,PPR_1|PF12854.3|1.9e-11,PPR_1|PF12854.3|2.6e-08,PPR_1|PF12854.3|5.1e-09,PPR_1|PF12854.3|0.00028,PPR_1|PF12854.3|4.2e-11,PPR_1|PF12854.3|2.2e-09,PPR_1|PF12854.3|0.039,PPR|PF01535.16|21,PPR|PF01535.16|2.2,PPR|PF01535.16|5.2e-08,PPR|PF01535.16|3.1e-06,PPR|PF01535.16|0.00011,PPR|PF01535.16|0.0012,PPR|PF01535.16|0.00013,PPR|PF01535.16|9.7e-07,PPR|PF01535.16|8.9e-06,PPR|PF01535.16|1.3e-05,PPR|PF01535.16|0.018,PPR|PF01535.16|6e-07,PPR|PF01535.16|2.6e-05,PPR|PF01535.16|42,PPR_3|PF13812.2|5e+02,PPR_3|PF13812.2|33,PPR_3|PF13812.2|0.0087,PPR_3|PF13812.2|0.0052,PPR_3|PF13812.2|1.3,PPR_3|PF13812.2|9.8,PPR_3|PF13812.2|0.00022,PPR_3|PF13812.2|0.002,PPR_3|PF13812.2|0.01,PPR_3|PF13812.2|0.024,PPR_3|PF13812.2|0.019,PPR_3|PF13812.2|0.00049,PPR_3|PF13812.2|0.0014,TPR_14|PF13428.2|9.8e+03,TPR_14|PF13428.2|1.3e+03,TPR_14|PF13428.2|1.9e+03,TPR_14|PF13428.2|11,TPR_14|PF13428.2|1.3e+02,TPR_14|PF13428.2|6.6e+03,TPR_14|PF13428.2|6.3e+03,TPR_14|PF13428.2|11,TPR_14|PF13428.2|3.7e+02,MRP-S27|PF10037.5|3.8e+02,MRP-S27|PF10037.5|4.2,MRP-S27|PF10037.5|0.52,MRP-S27|PF10037.5|0.84 S_Transcript_73889:212-1957(+)
MTIYSTELFPHCLPYISELRVPPSLNSYHICPITCRKTISHEIHTRTFPRLEAYSPATKSTLLQPVDFKETQLVKLIKKSYKTGNLNEALYFLHCMASRGYKPDVVLCTKLIKGFFNMKDVSKAIEVMEILESKGEPDVFAYNAMINGLCKVNKIEHANELLNRMKARGFSPDIVTYNIMIGSLCSRGKLNSALRLLDKLLKDNCQPTVVTYTILIEATIVEGGIKEATKLFNEMLERGLEPDMYVYNTMIRGMCKEGLANQALTFVRSLPLNGCHPDVISYNILLRALLDQGKWAEGEQLVREMLSRGCEPNLVTHSILITALCREGKVEEALNMLKVMLEQGLKPDNYSYDPLISAFCKEGKLDLAIGILDLMISNGCLPDIVNYNTVLAALCKNGKADQALEIFHKLGEVGCNPDVSSYNCLISALWNSGERSRAMRMVEGMINKGIDPDEITYNALLSCLCRDRMVDEAMELLQAMDKFSVKPTVISYNMIVLGLCKEHRMSDAVELLGQMVEKGCQPNETTYTLLIEGIGFAGWRIEAMELANSLAEMGAISPDSFRRLSKTFPIHVQRELAASGI*

Click here to download the sequence:
Link to NCBI Protein BLAST