Transcript Information: S_Transcript_74139.p1


Annotated TAIR IDAT5G08540.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2763914-2765431 | Forward length=346
E-Value1.1E-75
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 127.095120822774
Replicate 233.813623126191
Replicate 336.284078599258
Condition 2: 8 Hour
Replicate 137.16490124109
Replicate 241.744572642968
Replicate 344.021859184201
Condition 3: 24 Hour
Replicate 125.485697405693
Replicate 228.576110248438
Replicate 330.887865974381


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_74139.p1 GENE.S_Transcript_74139~~S_Transcript_74139.p1 ORF type:5prime_partial len:276 (+),score=36.88 S_Transcript_74139:2-829(+)
GCTCATGCCCATTTGCCCAATTCGGCCGCTATAGTAATACTGCCCTTAAGCCCAAAACCCAAAATCCTGGAACCAAAAACAAGAAAAATGCTCTGCTCAACATCGTCATCAACCTCTTCGATTCCCACTCGTTGTCAATGGCTACCAAGAAGACCATCTCCTCAAACCCAGAAAACATCCATTCTAATCCCTTCTTACTCTCCTCCCATTCTCTCTCCTCCTCTTCGTATTCTCAGACTCAAGTCCAAGGCCACTAGAAACTCATCCTCAGCACCCAAACCCAGCGACAATAAAAAACAACGACAACAACAAAATGAGGAAGTTGAAGAAATCCAAGTCGAAGAAGATATGCCTTGGATTCAAGATAAGGCCTTAGATTTGGTAGAATTTACAGGCGCTGTTACTCAAAAGATTCCTGGCCCTAGGGTTGGTCAGACCTCTTTGCCTTGGGTTTTGGCCCTCGCTTTCACTTACGCTGGTGTTAGCTTCGTTATCGCCGTCTTCAAGACCGTCAAGAAGTTCAATTCTCCTCGTGCCAAACGCCGTCAATTGGTTAATCAAAATGCGACGTTGATTAAGTCGATTGATGAGGTGTTCAAGAAAGGCAGAGAGGAACTTCAACATTGGTCGTTACAGGATCTTGTGAAGAAGACAGGTTTTGACATGGAGGAAATTCTGCGGAAATACATTCGTTATGCATTGAATGAGAAACCTTTCAATGGAGACTTGGTTGCAGATTTAATTCAACTAAGGAAAGCCTCGATGTTGACTGATTCCCAGGTTGCTGAAATTTTAAATGAAATCTCGAGGCGAATTGTCAAAGACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_74139.p1 GENE.S_Transcript_74139~~S_Transcript_74139.p1 ORF type:5prime_partial len:276 (+),score=36.88 S_Transcript_74139:2-829(+)
AHAHLPNSAAIVILPLSPKPKILEPKTRKMLCSTSSSTSSIPTRCQWLPRRPSPQTQKTSILIPSYSPPILSPPLRILRLKSKATRNSSSAPKPSDNKKQRQQQNEEVEEIQVEEDMPWIQDKALDLVEFTGAVTQKIPGPRVGQTSLPWVLALAFTYAGVSFVIAVFKTVKKFNSPRAKRRQLVNQNATLIKSIDEVFKKGREELQHWSLQDLVKKTGFDMEEILRKYIRYALNEKPFNGDLVADLIQLRKASMLTDSQVAEILNEISRRIVKD*

Click here to download the sequence:
Link to NCBI Protein BLAST