Transcript Information: S_Transcript_74311.p1


Annotated TAIR IDAT1G54710.1
Annotated Gene NameHomolog of yeast autophagy 18 (ATG18) H
Annotated Gene Symbol(s)ATATG18H, ATG18H
Annotation TypeOrtholog
Chromosome Positionchr1:20417019-20420733 | Reverse length=927
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.051672517872
Replicate 211.256066770178
Replicate 311.794336314156
Condition 2: 8 Hour
Replicate 110.423816040961
Replicate 28.5887850684083
Replicate 38.5306803551504
Condition 3: 24 Hour
Replicate 113.72534940295
Replicate 211.585777404609
Replicate 311.30111969272


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_74311.p1 GENE.S_Transcript_74311~~S_Transcript_74311.p1 ORF type:complete len:982 (+),score=198.22,BCAS3|PF12490.4|2.4e-71 S_Transcript_74311:198-3143(+)
ATGAAACAACACCAAACAAAGACTAACAATAACAACAACAGTAATAAGACAAATGGGTTTACACGTAACTCATTCAAGTTCATCTCATCTTGTATCAAGACTGTCTCTTCTGGTGTCCGCTCTGCTAGTGCCTCCGTTGCTGCTTCCATTTCTTCTGATTCTAATGACATCAAAGACCAGGTGCTCTGGGCTTGCTTTGACAGGATAGAACTCAGTCCATCTAGCTTCAAGCGTGTTCTGTTGCTTGGCTATACCAATGGCTTTCAAGTCCTCGATGTTGATACTGCTTCTACTGTCAGTGAGCTGGTTTCAAGGCGTGATGATCCGTGTACATTTCTGCAAATACAGCCCTTCCCTGCCAAATCTGAGGGCGTTGAAGGATTCAGAGCGTCACATCCTTTACTATTGGTTGCTGCAGGAGATGAAACAAACGGTCCAGATCCCACTCAGAGGAGGAGAGATGGGTCAGTTAGGGATGGCTTTGTTGACTCCCATACAGGGAACGCTGTCAGTTCTCCCACTGCTGTTCGTTTTTATTCTTTGAGATCTCACAACTATGTTCATGTTCTGAGATTCCGTTCTGCGGTATACACCGTTAGGTGCAGTCCCTGTATAGTTGCTGTGGGACTTGCTTCACAAATATACTGCTTTGATTCGGTCACTCTGGAGAATAAGTTCAGCGTTTTGACCTATCCTGTTCCTCAAATGGTTGGCCAAGGAACTGTCGGTATAAACATCGGTTATGGTCCTATGGATGTTGGACCTCGGTGGTTAGCATATGCTTCTAATAACCCGTTGTCAAACACAGGACGTTTGAGTCCTCAAAGTCTGACTCCATCTCCTGGTGTAAGCCCTTCAACTTCGCCCAGCAGCGGAAGTTTGGTAGCAAGGTATGCTATGGAGTCTAGCAAACAATTGGCTGCTGGACTGATTAATCTTGGTGACATGGGCTACAAAACATTCTCCAAGTACTGTCAAGAGTTGCTTCCTGATGGTTCAAGCTCTCCTGTAACGTCCAGTTCCGGATGGAAAGTTACAAAGACTTCCGGAAGTTCACCAGAGATGGAGACTGCTGGGATGGTTATTGTGAAAGATTTTGTATCTAGAGCTGTCATAACGCACTTTAGGGCTCACACAAGTCCTATCTCTGCCCTTTGTTTTGATCCGAGTGGGACACTTCTGGTTACTGCATCAATACATGGTAATAATATAAATATCTTTCGAATTATGCCGTCATGCTCACAGAATGGTTCAGGCAATCAGGGCTATACTTGGACTGCTTCTCATGCGCATCTGTACAAACTTCATCGTGGCATAACATCTGCTGTCATTCAGGATATCTGTTTTAGCCAATATAGCCAATGGGTAGCTATAGTTTCATCCAAGGGAACTTGTCACATCTATGCTTTATCGCCTTTTGGTGGGGAGTGTGGTCTTCAAGTTCAAACTACTCATGCTGATGGGCCCACCCTTGTACCTTTTTTATCTTCTCCATGGTGGTCAACTTCATCCTACACTGTAAATCAACAGTCGTTTTCTGCTCCTCCACCTCCAGTTACTCTATCTGTGATTAGTAGGATAAGAACTGGTAACTCTGGGTGGCTCAACACAGTCAGCAATGCTGCATCATCTGCAGCTGGTATGGTTTCCTCACCATCGTGTGCTGTTTCTGCTGTTTTCCATTGTTCGATGCCTAATGCCTTGCAGCCTGGACGCTCTAAGACAAACACCTTGGAGCATCTTTTGGTTTACTCTCCCTCGGGTCATCTTATCCAATATGAACTTCTCCCATCTGTTGGGGCAGAGGCAAGTGATGTTGCCTCTAGGAATACTTCAGGATCACTGATGCAAATACAAGATGAGGACTTAAGGGTGAAGGCTGAATCCAGTCAGTGGTGGGATGTTTGCCGAAGGACAGATTGGCCGGAAAGAGAAGAGTGCATCAAGGGGTTAACCTTTGGAAGGAAAGATCCCTCAGACATAGCCATGGATACTTCTGACTGTGAAGACAATAATGATATTGTTGGAAAGGGAGAGGAACCTCATGACCGATGGACCTTGTATCTATCCAAAGCGGAGGTGCAGATGAACTATGGAAGAATACCAACTTGGCAAAATTCCAAGATTCATTTCTTCGCTATGAGTCCTGTGCCGGCACCTGACAGGCAGAAATCTTCTGATGAGGATGTTGGTGGAGAAATTGAGATTGAGAAGGTCCCCCATCTTGAGATTGAAATTAAGCGGAAAGATTTATTGCCTGTTTTTGAGCACTTCCATAAGCTGAAGCCTGATTGGAGCAACAGTGATGAAAGATACCCATCTTCAGCATCCGAAGCTCATCTGGCGGAGGAGAGGTACATGTCTGATACTGCTATGTACCCTCAACCTGTTCAGAACTCCCGGTTTGGATCTTCTTCTCCAGATGGCGAAATGGATATGATTAAGACTTATCTGGGATTCCCTCAAGGTTCCAATATTAAGAGCGGCATAAAAGTTTCTTCTACTTTTTCTTCAACTCTACTGACTCAGAACTTACTGAAAACTGACAAATCCATGATGGAGATCTCTCCACCAGAGACCAGTTGTATTGTAAATAGTCCATCCTCTTTAAATAATGTCTCGCTTGTGGCTGAAAGAGCTACTTCGAAGGAAGTCCAATCATCAAACAGTGTTGGAACAAGTGAGGCTTCAAATGTTAGTTCTAACCGTTCTGATTTTAGTATGAACGTTGTTGATGAGGGCTCTGTTCAAGACCAGTTAGATTTTGGGGGTTATTTTCAAGAGGAATATTGTAAAGCTGCACCTCTTGATGGAACCCATGAGATGTCGGAAGTTGTTACTGATGTAGATAGCAGCAGCAGCCCCTGTGACAAAGAGAAGTCGGAGGAAGATGGAGAGAATGATGATATGCTTGGAGGTGTTTTTGCTTTCTCTGAAGAAGGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_74311.p1 GENE.S_Transcript_74311~~S_Transcript_74311.p1 ORF type:complete len:982 (+),score=198.22,BCAS3|PF12490.4|2.4e-71 S_Transcript_74311:198-3143(+)
MKQHQTKTNNNNNSNKTNGFTRNSFKFISSCIKTVSSGVRSASASVAASISSDSNDIKDQVLWACFDRIELSPSSFKRVLLLGYTNGFQVLDVDTASTVSELVSRRDDPCTFLQIQPFPAKSEGVEGFRASHPLLLVAAGDETNGPDPTQRRRDGSVRDGFVDSHTGNAVSSPTAVRFYSLRSHNYVHVLRFRSAVYTVRCSPCIVAVGLASQIYCFDSVTLENKFSVLTYPVPQMVGQGTVGINIGYGPMDVGPRWLAYASNNPLSNTGRLSPQSLTPSPGVSPSTSPSSGSLVARYAMESSKQLAAGLINLGDMGYKTFSKYCQELLPDGSSSPVTSSSGWKVTKTSGSSPEMETAGMVIVKDFVSRAVITHFRAHTSPISALCFDPSGTLLVTASIHGNNINIFRIMPSCSQNGSGNQGYTWTASHAHLYKLHRGITSAVIQDICFSQYSQWVAIVSSKGTCHIYALSPFGGECGLQVQTTHADGPTLVPFLSSPWWSTSSYTVNQQSFSAPPPPVTLSVISRIRTGNSGWLNTVSNAASSAAGMVSSPSCAVSAVFHCSMPNALQPGRSKTNTLEHLLVYSPSGHLIQYELLPSVGAEASDVASRNTSGSLMQIQDEDLRVKAESSQWWDVCRRTDWPEREECIKGLTFGRKDPSDIAMDTSDCEDNNDIVGKGEEPHDRWTLYLSKAEVQMNYGRIPTWQNSKIHFFAMSPVPAPDRQKSSDEDVGGEIEIEKVPHLEIEIKRKDLLPVFEHFHKLKPDWSNSDERYPSSASEAHLAEERYMSDTAMYPQPVQNSRFGSSSPDGEMDMIKTYLGFPQGSNIKSGIKVSSTFSSTLLTQNLLKTDKSMMEISPPETSCIVNSPSSLNNVSLVAERATSKEVQSSNSVGTSEASNVSSNRSDFSMNVVDEGSVQDQLDFGGYFQEEYCKAAPLDGTHEMSEVVTDVDSSSSPCDKEKSEEDGENDDMLGGVFAFSEEG*

Click here to download the sequence:
Link to NCBI Protein BLAST