Transcript Information: S_Transcript_74427.p2


Annotated TAIR IDAT1G20696.2
Annotated Gene Namehigh mobility group B3
Annotated Gene Symbol(s)HMGB3, NFD3, NFD03
Annotation TypeOrtholog
Chromosome Positionchr1:7179825-7181193 | Forward length=147
E-Value1.5E-51
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1422.98186033968
Replicate 2358.86201067887
Replicate 3353.67618666515
Condition 2: 8 Hour
Replicate 11015.5037636858
Replicate 2927.93676614512
Replicate 3858.85888624319
Condition 3: 24 Hour
Replicate 1319.74723268533
Replicate 2289.61543288713
Replicate 3316.50317669429


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_74427.p2 GENE.S_Transcript_74427~~S_Transcript_74427.p2 ORF type:3prime_partial len:113 (+),score=33.97,HMG_box|PF00505.15|2.4e-24,HMG_box_2|PF09011.6|2.7e-17 S_Transcript_74427:361-696(+)
ATGAAGGGAGGAAAATCCAAGGCCGAGCCTAAGCGCTCCGAGAGCAAGCTGTCTGTGAAGAAAGGAGCAGCGGCTAAGAAAGGAAAGCCTGCTAAGGATCCTAACAAGCCTAAGAGGCCTCCTAGCGCCTTCTTCGTTTTCATGGAGGAATTTAGAGTGACATACAAACAAAAGCATCCTAACAACAAATCTGTCGCCGCTGTTGGGAAAGCCGGTGGTGAGAAGTGGAAGTCCCTTACTGAAGCTGAGAAAGCACCTTACATCCAGAAGGCCGAGAAGAGGAAAGCTGAGTATGAAAGGAATATGAATTCGTACAACAAGAGATTGGCTGAAGGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_74427.p2 GENE.S_Transcript_74427~~S_Transcript_74427.p2 ORF type:3prime_partial len:113 (+),score=33.97,HMG_box|PF00505.15|2.4e-24,HMG_box_2|PF09011.6|2.7e-17 S_Transcript_74427:361-696(+)
MKGGKSKAEPKRSESKLSVKKGAAAKKGKPAKDPNKPKRPPSAFFVFMEEFRVTYKQKHPNNKSVAAVGKAGGEKWKSLTEAEKAPYIQKAEKRKAEYERNMNSYNKRLAEG

Click here to download the sequence:
Link to NCBI Protein BLAST