Transcript Information: S_Transcript_74435.p1


Annotated TAIR IDAT1G20693.1
Annotated Gene Namehigh mobility group B2
Annotated Gene Symbol(s)HMGB2, HMG BETA 1, NFD2, NFD02
Annotation TypeOrtholog
Chromosome Positionchr1:7177282-7178487 | Forward length=144
E-Value1.7E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1433.67095194601
Replicate 2342.97609221228
Replicate 3323.16703455582
Condition 2: 8 Hour
Replicate 1767.95638539766
Replicate 2740.30480953277
Replicate 3656.67344155801
Condition 3: 24 Hour
Replicate 1283.48701075294
Replicate 2262.9517229483
Replicate 3265.69130867662


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_74435.p1 GENE.S_Transcript_74435~~S_Transcript_74435.p1 ORF type:5prime_partial len:88 (+),score=37.68,HMG_box|PF00505.15|3.1e-12,HMG_box|PF00505.15|5.5e+03,HMG_box_2|PF09011.6|1.2e-07 S_Transcript_74435:1-264(+)
AACAACAAATCTGTCGCCGCTGTTGGGAAAGCCGGTGGTGAGAAGTGGAAGTCCCTTACTGAAGCTGAGAAAGCACCTTACATCCAGAAGGCCGAGAAGAGGAAAGCTGAGTATGAAAGGAATATGAATTCGTACAACAAGCGATTGGCTGAAGGTACTAAACATGAGGAAGAGGAAGAGGAGTCTGACAAGTCTAGGTCTGAGGTTAATGATGAGGATGACGATGACGAAGACGAAGGCAGCGGCGAGGAGGATGATGATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_74435.p1 GENE.S_Transcript_74435~~S_Transcript_74435.p1 ORF type:5prime_partial len:88 (+),score=37.68,HMG_box|PF00505.15|3.1e-12,HMG_box|PF00505.15|5.5e+03,HMG_box_2|PF09011.6|1.2e-07 S_Transcript_74435:1-264(+)
NNKSVAAVGKAGGEKWKSLTEAEKAPYIQKAEKRKAEYERNMNSYNKRLAEGTKHEEEEEESDKSRSEVNDEDDDDEDEGSGEEDDD*

Click here to download the sequence:
Link to NCBI Protein BLAST