Transcript Information: S_Transcript_7456.p1


Annotated TAIR IDAT1G76160.1
Annotated Gene NameSKU5 similar 5
Annotated Gene Symbol(s)sks5
Annotation TypeOrtholog
Chromosome Positionchr1:28578211-28581020 | Reverse length=541
E-Value2.5E-302
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.8089239686039
Replicate 24.1418991548494
Replicate 33.7365394667518
Condition 2: 8 Hour
Replicate 15.2718901713359
Replicate 27.1107548650432
Replicate 38.7165176079849
Condition 3: 24 Hour
Replicate 11.7459665243412
Replicate 22.3169324102214
Replicate 32.4846995417679


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_7456.p1 GENE.S_Transcript_7456~~S_Transcript_7456.p1 ORF type:complete len:538 (+),score=72.93,Cu-oxidase_3|PF07732.11|2e-37,Cu-oxidase_3|PF07732.11|4.9e+03,Cu-oxidase|PF00394.18|3.3e+03,Cu-oxidase|PF00394.18|4.2e+02,Cu-oxidase|PF00394.18|4.4e-34,Cu-oxidase|PF00394.18|89,Cu-oxidase_2|PF07731.10|4.5e+02,Cu-oxidase_2|PF07731.10|5.3e+02,Cu-oxidase_2|PF07731.10|1.3e-25 S_Transcript_7456:513-2126(+)
ATGGGGGAGAAGTATTTGTTATTCTTTGTAATACTACTAGTGAGCAGCTACTGTAAAGGGGAGAGCCCTTACAGATTCTACACTTGGAATGTTACTTATGGTGATATTTATCCTCTTGGTGCCAAGCAACAGGGGATATTGATAAATGGGCAATTTCCAGGACCTCCAATTGAGGCTGTTACTAATGATAATTTGGTCATCAGTGTTTTCAATGGCTTGGATGAACCTTTCCTCCTTTCCTGGAATGGAATACAGCAGAGAAAGAACTCATGGCAAGATGGTGTATATGGCACCAACTGCCCCATCCCACCAGGAAAGAACTTCACATATATTCTCCAAGCTAAAGATCAGATTGGCAGTTACTTCTACTTCCCTTCTCTTGCCTTCCACAAGGCTGCAGGAGGTTATGGTGGCATCAAACTCGAAAGTCGCCCCTTGATCCCCGTGCCATTCCCTCCCCCTGCTGGAGATTTTACTGTTCTTGCTGGAGACTGGTTTAAGATGAATCACACTGATTTAAAGGCTATCTTGGACAATGGAAGTGATTTGCCTTTCCCTGACGGGCTGCTCATTAATGGTCGCGGATCAAATGGAATCACATTCACAGTTGAACAAGGCAAGACGTACAGATTCAGGATATCGAATGTTGGGATAGGAACAACGATCAATTTCAGAATCCAAGGGCACAAATTGCTGTTAACAGAAGGTGACCACACACTACAGAACACTTATTCCTCCCTCGACGTTCATTTGGGACAATCCTATTCAGTACTTGTGACAGCTGATCAAGCTCCTCAAGATTACTACATCGTTGTCTCTACTCGTTTCACTTCTCAAGTACTCACCTGTACTGCTACTCTCCACTATAGTAACTCAGCCGGAGGTGTTTCTGGCCCTTCCCCTGGGGGCCCCACAACAGAGGTTGACTGGTCTATTAACCAGGCTAGATCCATCAGGCAGAACCTGACTGCTAGTGGGCCAAGGCCAAATCCACAAGGTTCCTATCATTATGGGTTGATCAACACCACTCGTACAATCAGATTAGCAAATTCAGCTCCAGTGATCAATGGGAAGCAGAGGTACGCTGTAAACAGCGTGTCCTTCATCCCAGCAGATACGCCCTTGAAGCTTGCAGATTACTTCAACATTCCTGGTGTGTTCACCCTTGGAAGCATCCCAGACAACCCCAATGGTGCTGGCGCTTTTCTCCAGACGTCTGTCATGGAAGCTGACTATCGAGCTTATGTGGAAGTTGTGTTTGAGAACCCTGAAGACACCATCCAGTCTTGGCACATCGATGGCCAAATATTCTTCGTTGTTGGAATGGACGGAGGACAATGGTCACCTGACAGCAGATCAAGTTACAATCTAAGAGACACAATTTCTAGATCAACTGTTCAGGTCTATCCTAATTCATGGACAGCAGTTTATATGCCACTGGATAATGTGGGAATGTGGAATGTAAGATCACAAAACTGGGCGCGCCAATACTTGGGGCAACAGTTCTATCTTCGAGTCTATACGACTTCTACTTCCTATAGAGATCAATATCCCATTCCGCGCAATGCAATTCTTTGTGGTCGGGCAATAGGCCACAAGACAAGGCTTCTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_7456.p1 GENE.S_Transcript_7456~~S_Transcript_7456.p1 ORF type:complete len:538 (+),score=72.93,Cu-oxidase_3|PF07732.11|2e-37,Cu-oxidase_3|PF07732.11|4.9e+03,Cu-oxidase|PF00394.18|3.3e+03,Cu-oxidase|PF00394.18|4.2e+02,Cu-oxidase|PF00394.18|4.4e-34,Cu-oxidase|PF00394.18|89,Cu-oxidase_2|PF07731.10|4.5e+02,Cu-oxidase_2|PF07731.10|5.3e+02,Cu-oxidase_2|PF07731.10|1.3e-25 S_Transcript_7456:513-2126(+)
MGEKYLLFFVILLVSSYCKGESPYRFYTWNVTYGDIYPLGAKQQGILINGQFPGPPIEAVTNDNLVISVFNGLDEPFLLSWNGIQQRKNSWQDGVYGTNCPIPPGKNFTYILQAKDQIGSYFYFPSLAFHKAAGGYGGIKLESRPLIPVPFPPPAGDFTVLAGDWFKMNHTDLKAILDNGSDLPFPDGLLINGRGSNGITFTVEQGKTYRFRISNVGIGTTINFRIQGHKLLLTEGDHTLQNTYSSLDVHLGQSYSVLVTADQAPQDYYIVVSTRFTSQVLTCTATLHYSNSAGGVSGPSPGGPTTEVDWSINQARSIRQNLTASGPRPNPQGSYHYGLINTTRTIRLANSAPVINGKQRYAVNSVSFIPADTPLKLADYFNIPGVFTLGSIPDNPNGAGAFLQTSVMEADYRAYVEVVFENPEDTIQSWHIDGQIFFVVGMDGGQWSPDSRSSYNLRDTISRSTVQVYPNSWTAVYMPLDNVGMWNVRSQNWARQYLGQQFYLRVYTTSTSYRDQYPIPRNAILCGRAIGHKTRLL*

Click here to download the sequence:
Link to NCBI Protein BLAST