Transcript Information: S_Transcript_74648.p1


Annotated TAIR IDAT4G21770.1
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:11564028-11566345 | Reverse length=472
E-Value3.5E-171
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.696735604931
Replicate 28.0752693805283
Replicate 38.0159604546369
Condition 2: 8 Hour
Replicate 18.641661435701
Replicate 26.5799554822725
Replicate 37.4535806984739
Condition 3: 24 Hour
Replicate 18.2810669441468
Replicate 29.4062224516213
Replicate 37.8303732630262


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_74648.p1 GENE.S_Transcript_74648~~S_Transcript_74648.p1 ORF type:5prime_partial len:306 (+),score=58.12,PseudoU_synth_2|PF00849.18|4e-23 S_Transcript_74648:3-920(+)
GGGAAAACTGTTCGAGAAGCACAAAAAACTTTCAGAGTAACTCGTGTTGATGAACTTTTTGAAGTTGGAACATACTTGCGTGTACATGTGCACCCAAAACGCTTCCCAAGGTGCTATGAAATTGATTGGAAGTCAAGAATCTTAGCAGTGACTGAATCATATGTGGTCCTGGACAAACCTGCTGGTACCTCTGTTGGAGGAACTTCTGACAACATTGAAGAAAGCTGTGCAAATTTTGCCACTCGTGCCTTAGAATTGACTTCTCCACTCCTTACTACACATCAGATTGATAATTGCACTGAAGGATGTGTTGTGCTGGCTAGAACGAAGGAGTACTGCTCTGTTTTTCACAAAAAGATCAGAGATAAAAAGGTTAATAAGTTGTACCTTGCACTTGCTGCTGCTCCAGTTCCATGTGGAATAATTACCCATTTCATGCGCCCAGCTAATCTTGCTCCACGACTAATTTCAGAAGAATATATTGAAAGATGGCTCTTGTGCCAACTTGAGGTCTTGGATTGCAAGGAGGTTCCTTGGCCAAACACTTCCACTCAAGAGAGATATCGGATCGAAGACTGTGGATGGCCTATAAAGAATACTGCTTATGAGTGTACAGTTAATCTTTTGACTGGCCGAACTCACCAGATTCGAGCTCAGTTTGCTGCATGTGGAGCACCTATAGTTGGCGATTCAATGTACATGCCAGCTTCTCTTGCAGAAATAGCCGATCCTGGAGTTAATCCATTAGGCATCAATAAAAGAGATTATCTGAGCGAGGATGACAAAAGAATTGCTGTAGAGAATTGGATTGCGCTACATGGGAAGGAGCCTCCTGTTGCTATTGGTCTTCAAGCCTGCCAAATCTCATGGGATAAGGATGAACATATTTACAATGCCCGATCACCTTGGTGGAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_74648.p1 GENE.S_Transcript_74648~~S_Transcript_74648.p1 ORF type:5prime_partial len:306 (+),score=58.12,PseudoU_synth_2|PF00849.18|4e-23 S_Transcript_74648:3-920(+)
GKTVREAQKTFRVTRVDELFEVGTYLRVHVHPKRFPRCYEIDWKSRILAVTESYVVLDKPAGTSVGGTSDNIEESCANFATRALELTSPLLTTHQIDNCTEGCVVLARTKEYCSVFHKKIRDKKVNKLYLALAAAPVPCGIITHFMRPANLAPRLISEEYIERWLLCQLEVLDCKEVPWPNTSTQERYRIEDCGWPIKNTAYECTVNLLTGRTHQIRAQFAACGAPIVGDSMYMPASLAEIADPGVNPLGINKRDYLSEDDKRIAVENWIALHGKEPPVAIGLQACQISWDKDEHIYNARSPWWR*

Click here to download the sequence:
Link to NCBI Protein BLAST