Transcript Information: S_Transcript_74683.p1


Annotated TAIR IDAT5G58440.1
Annotated Gene Namesorting nexin 2A
Annotated Gene Symbol(s)SNX2a
Annotation TypeOrtholog
Chromosome Positionchr5:23624154-23626676 | Reverse length=587
E-Value6.4E-237
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.864955050031
Replicate 223.488616093545
Replicate 323.241611289027
Condition 2: 8 Hour
Replicate 129.594419215613
Replicate 229.258421095153
Replicate 330.269953656734
Condition 3: 24 Hour
Replicate 127.231802038445
Replicate 222.972162754257
Replicate 320.632318637518


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_74683.p1 GENE.S_Transcript_74683~~S_Transcript_74683.p1 ORF type:complete len:588 (+),score=115.30,PX|PF00787.20|1e-20,Vps5|PF09325.6|3.2e-20 S_Transcript_74683:179-1765(+)
ATGGAGAGCTTAGTCCTCGACGACCATCCCCAACCTTCCTCCAATGGCGGTCCTCATTCACCTCCTCCCGAGATCTCCACCACCACTATTGACGACAACAACAACTTACCTAACCCTACCGAAGCCCTAAATCGCTCTTCTCCTTCAAAAAACCCTAATTCCTCCTCCCTCAACTCCTTCTTAGACCCTCCCTCTTACGCCGACGCTATGTTTCGCTCCTTCGATTTCGATTCCTCCGCCGAGATCGATGGCCACGATCATTCCAGCTCATCATCATCGTCCACTTCGGATTACCTCCACATTTCGGTATCGGACCCTCAGAAGGTTCTGGAAACTTCTAATTCGCTGGTTCCTGGGAGCGGTTCTTACTACACTTACCTAATCACGACACGAACTAACTTGCCGGAGTTCGAATCAAAGGAGTTTAGCGTCAGGAGGAGGTTCAGAGAGGTGGTGACGTTGTCGGAGCGCTTGTCGGAGGCATACCGAGGGTTCTTTATTCCGTTGAGGCCGGATAAGAGCGTAATGGAGAGCCAAATGATGCAAACGGCTGAGTTCGTGGAGCAAAGGCGAGTTGCCGTCGAGAAGTACTTGAGGAAACTGGCTGCTCATCCTGCTCTTAGGAAGAGTGATGAGCTGAGAGTGTTTTTGCAGGTGGAAGGGAAGCTGCCGTTGGTGAAGACGACCGATGTCGCATCGAGGATGCTTGATGGAGTGGTTAAGTTGCCGAGTCAGCTAATTGGAGACTCCGCTGTCACGCCACAGGAGGTGGTGCAACCAGCTAAAGGTGGTAGGGACTTGTTGAGGTTGTTTAAGGAGCTTAGACAGGCTGTTGCTAATGACTGGGGCGGGGCGAAACCACCTGTTGTTGAGGAGGATAAGGAGTTCTTGGAGAAGAAGGAGAGGCTTACTGAGCTTGAACAGCAACTTAGCAATGTGTCTGAACAGGCGGAAACACTAGTGAAAGCACAACAAGATATTGGGGAAACAATGGGGGAGCTAGGGTTGGCGTTTGTTAAGTTGACAAAGTTTGAGATTGAAGAAGCCATTTATGAGTGCCAACGAGCAAGTGCGGGTGATATGAAGAATGTGGCAACAGCTTCAGTTAAAGCGAGCAGACTTTATCGCGAATTGAATGCACAGACTGTGAAGCATTTGGACAAGCTCCATGATTATCTAGGGATGATGTTAGCTGTTGATAATGCCTTTACAGACCGCTCCAATGCTTTGTTAACTGTCCAAACTCTTGTATCCGAGGTGGCTACATTGCAGTCAAGAATCGAAAAGCTAGAACTTGCTTCCTCCAAAATATTTGGTGGAGACAAGTCTAGGATGCGCAAAATTGAAGAATTGAAGGAAACGATGAAAGTGACTGAGGATGCTAAATGTTGTGCTGCTAGAGAGTATGAAAGGATCAAGGACAACAACAGGAGTGAGCTTGCAAGACTAGACGAAGAAAGATGTACGGACTTTTTGAGTATGCTGAAAGGGTTTGTGGTAAATCAGGCTGGATATGCAGAAAAGATGGCTAGTGTCTGGGAAAAGGTTGCAGAGGAAACCAGTGGCTATGCAAAAGATTTTAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_74683.p1 GENE.S_Transcript_74683~~S_Transcript_74683.p1 ORF type:complete len:588 (+),score=115.30,PX|PF00787.20|1e-20,Vps5|PF09325.6|3.2e-20 S_Transcript_74683:179-1765(+)
MESLVLDDHPQPSSNGGPHSPPPEISTTTIDDNNNLPNPTEALNRSSPSKNPNSSSLNSFLDPPSYADAMFRSFDFDSSAEIDGHDHSSSSSSSTSDYLHISVSDPQKVLETSNSLVPGSGSYYTYLITTRTNLPEFESKEFSVRRRFREVVTLSERLSEAYRGFFIPLRPDKSVMESQMMQTAEFVEQRRVAVEKYLRKLAAHPALRKSDELRVFLQVEGKLPLVKTTDVASRMLDGVVKLPSQLIGDSAVTPQEVVQPAKGGRDLLRLFKELRQAVANDWGGAKPPVVEEDKEFLEKKERLTELEQQLSNVSEQAETLVKAQQDIGETMGELGLAFVKLTKFEIEEAIYECQRASAGDMKNVATASVKASRLYRELNAQTVKHLDKLHDYLGMMLAVDNAFTDRSNALLTVQTLVSEVATLQSRIEKLELASSKIFGGDKSRMRKIEELKETMKVTEDAKCCAAREYERIKDNNRSELARLDEERCTDFLSMLKGFVVNQAGYAEKMASVWEKVAEETSGYAKDFS*

Click here to download the sequence:
Link to NCBI Protein BLAST