Transcript Information: S_Transcript_74707.p1


Annotated TAIR IDAT4G15560.1
Annotated Gene NameDeoxyxylulose-5-phosphate synthase
Annotated Gene Symbol(s)CLA1, DEF, CLA, DXS, DXPS2
Annotation TypeOrtholog
Chromosome Positionchr4:8884218-8887254 | Forward length=717
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.793560662153
Replicate 27.3749212284951
Replicate 35.8799172626086
Condition 2: 8 Hour
Replicate 14.0134863799099
Replicate 23.6448517446746
Replicate 33.9518144436201
Condition 3: 24 Hour
Replicate 17.1179957441262
Replicate 27.0346943235573
Replicate 35.7741478062274


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_74707.p1 GENE.S_Transcript_74707~~S_Transcript_74707.p1 ORF type:complete len:712 (+),score=148.10,DXP_synthase_N|PF13292.2|1.1e-111,DXP_synthase_N|PF13292.2|4.7e+03,Transket_pyr|PF02779.20|6.4e-42,Transketolase_C|PF02780.16|2.6e-30,E1_dh|PF00676.16|4e-07 S_Transcript_74707:157-2292(+)
ATGGCGGTGCAAGGCGCTTTCACAATCCCACCCTCACCTCTACGTGCTTGTTTAACGCCTTCTCTACGAAACATCAGCCACCAAAGACGGCTGATCATGAGAGCTTCAGCTAGCAGCGACTCAAATGAGGAGAGTAAGAAGTTGATTAGGAAGGAAATTGATGGCTGGAAAATAGAGTACACAGGGGAGAAACCAGCCACTCCCTTGCTGGACACTATTAAATACCCTGTGCACATGAGAAACCTGTCTACTGAGGATCTTGCACAGCTAGCAGCAGAGCTTAGAGCAGAAATGGTATATGCAGTGGCAAAAACAGGTGGGCACTTGGGCGCAAGCTTGGGGGTAGTGGAGCTAACAGTGGCCCTACACCATGTCTTTAACACACCTGACGACAGAATCATTTGGGATGTTGGTCATCAGGCATATCCACACAAAATTCTAACGGGACGAAGATCTAAGATGCAAACAATAAGGAAGACCTCAGGACTTGCAGGGTTTCCAAAAAGAGATGAAAGTATATATGATGCTTTTGGTACAGGGCATAGTTCAACTAGCATATCTGCTGGTCTTGGCATGGCAGTCGCGAGAGACCTTTTAGGAAAAAAGAACAATGTTATTTCAGTGATTGGGGATGGAGCGATGACTGCAGGACAGGCATATGAGGCTTTAAATAATGCAGGGTACCTTGACACTAACCTCATTGTCATACTGAATGACAATAAGCAAGTTTCTTTGCCCACCGCAACTCTTGATGGGCCTGCAACTCCTGTTGGAGCACTCAGCAGCGCTCTTTCAAAGCTCCAAGCAAGTCCCAAATTCCGAAAACTTCGGGAAGCGGCCAAGAGCATCACAAAGCAAATTGGAGGAGAAACTCACAAGGTTGCAGCAAAAGTGGATGAATATGCAAGAGGCATGATCGGTGGTACAGGATCTACACTATTTGAAGAACTTGGTTTGTACTACATTGGGCCTGTGGATGGGCATAACATAGATGACCTGATCACAATATTAAAGCAAGTCAAAGAAATGCCAGCACCAGGGCCAGTTTTAATTCACACAGTCACTGAGAAAGGGAAGGGCTACCCACCAGCAGAGGCAGCATCTGACAGAATGCATGGTGTCGTAAAGTTCAACCCAGAATCAGGAAAGCAGTTCAAACCCAAATCCACTACACTTTCATATACAGAATACTTTGCTCAGGCTTTAACAAAAGAAGCGGAGGTAGATGAGAAGATTGTGGCTCTTCATGCTGCAATGGGTGGTGGAACAGGTCTAAACTACTTCCAGAAGAGATTTCCCAATCGTTGCTTTGACGTGGGCATTGCCGAGCAGCATGCTGTAACATTTGCAGCAGGTCTGGCAACAGAGGGCCTCAAGCCTTTCTGCACCATCTACTCATCGTTTCTACAGCGAGGATATGATCAGGTGGTGCATGATGTAGATCTCCAAAGACTGCCCGTCAGATTTGCCATGGATAGAGCCGGTTTAGTGGGTGCAGATGGACCAACCCACTGTGGTGCGTTTGATATCACCTACATGGCTTGTTTGCCAAATATGATTGTTATGGCTCCATCAGATGAAGCAGAGCTGATGCACATGGTTGCAACAGTGGCAGCTATAGATGACAGGCCAAGCTGCTTCAGATACCCAAGGGGGAAGGGGATAGGAGTATCCCTTCCACCTGACAATAAAGGAACACCACTTGAGATTGGAAGGGGGAGAGTATTGGTTGAAGGGACCAAGGTTGCAATGCTGGGTTATGGCTCTATGGTTCAACAATGCCTAGAAGCCGCATCTTTGCTCAAAGAGCGGGACATTTTATTGACAGTGGCTGATGCGAGGTTCTGCAAACCTCTGGATGGAGATCTTATCAGGAAACTTGCAAATGAACATGAAATACTCATAACCGTAGAGGAGGGCTCTATAGGAGGTTTTGCTTCTCATGTGTCACACTTCCTTTGTCTCAATGGTCTTTTGGATGGACCCCTCAAGTTCAGAGCAATGGTCCTTCCAGACAGATACATTGATCATGGAGATTACCAAGACCAGTTGGAAGAAGCAGGATTGACTTCAAAACATATTGCAGCAACTGTGTTGTCTATGCTGGGGATGCAAATGGAAGCTCTTACACTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_74707.p1 GENE.S_Transcript_74707~~S_Transcript_74707.p1 ORF type:complete len:712 (+),score=148.10,DXP_synthase_N|PF13292.2|1.1e-111,DXP_synthase_N|PF13292.2|4.7e+03,Transket_pyr|PF02779.20|6.4e-42,Transketolase_C|PF02780.16|2.6e-30,E1_dh|PF00676.16|4e-07 S_Transcript_74707:157-2292(+)
MAVQGAFTIPPSPLRACLTPSLRNISHQRRLIMRASASSDSNEESKKLIRKEIDGWKIEYTGEKPATPLLDTIKYPVHMRNLSTEDLAQLAAELRAEMVYAVAKTGGHLGASLGVVELTVALHHVFNTPDDRIIWDVGHQAYPHKILTGRRSKMQTIRKTSGLAGFPKRDESIYDAFGTGHSSTSISAGLGMAVARDLLGKKNNVISVIGDGAMTAGQAYEALNNAGYLDTNLIVILNDNKQVSLPTATLDGPATPVGALSSALSKLQASPKFRKLREAAKSITKQIGGETHKVAAKVDEYARGMIGGTGSTLFEELGLYYIGPVDGHNIDDLITILKQVKEMPAPGPVLIHTVTEKGKGYPPAEAASDRMHGVVKFNPESGKQFKPKSTTLSYTEYFAQALTKEAEVDEKIVALHAAMGGGTGLNYFQKRFPNRCFDVGIAEQHAVTFAAGLATEGLKPFCTIYSSFLQRGYDQVVHDVDLQRLPVRFAMDRAGLVGADGPTHCGAFDITYMACLPNMIVMAPSDEAELMHMVATVAAIDDRPSCFRYPRGKGIGVSLPPDNKGTPLEIGRGRVLVEGTKVAMLGYGSMVQQCLEAASLLKERDILLTVADARFCKPLDGDLIRKLANEHEILITVEEGSIGGFASHVSHFLCLNGLLDGPLKFRAMVLPDRYIDHGDYQDQLEEAGLTSKHIAATVLSMLGMQMEALTL*

Click here to download the sequence:
Link to NCBI Protein BLAST