Transcript Information: S_Transcript_74738.p1


Annotated TAIR IDAT4G29090.1
Annotated Gene NameRibonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:14333528-14335255 | Forward length=575
E-Value7E-63
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.25345715462077
Replicate 20.36293766371669
Replicate 30.28741926364053
Condition 2: 8 Hour
Replicate 12.4371874648152
Replicate 21.5301957078255
Replicate 31.8824384897906
Condition 3: 24 Hour
Replicate 10.35935306175003
Replicate 20.52980338749903
Replicate 30.3712335540147


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_74738.p1 GENE.S_Transcript_74738~~S_Transcript_74738.p1 ORF type:complete len:1155 (+),score=168.53,RVT_3|PF13456.2|2.4e+03,RVT_3|PF13456.2|2.5e-16,zf-RVT|PF13966.2|9.9e+03,zf-RVT|PF13966.2|2.7e-14,Exo_endo_phos|PF03372.19|2.3e-06,Exo_endo_phos|PF03372.19|3.2e+02,RVT_1|PF00078.23|5e-06 S_Transcript_74738:454-3918(+)
ATGAGTCTCTTATGTCTCAACTGCCGAGGACTTGGCGACCCTCGGGCAGTTTCAGGTCTACAGGGCTTGCTACGTAGATTTAAGCCAAACTTAGTCTTCTTATCGGAGACTAAGCTTAATGGAGGTGAGACAACCTCTTTGTTATGTAAACTTAAGGAGTACAAAGGGAGTTTTGTGGATGGAGTAGGTAGGGCGGGAGGACTTGCTCTTTTATGGGCTGAAGAGTGGGAGGTGATTGTCCGATCAAGCTCCTTGAACCATATAGATGTTCTGGTGGATACTAGAGAAGAAGAAGAGGCTAGGCCATGGAGATTTACTGGTATTTATGGGTGGCCTGAGCATCACAATAAGATTCACACTTGTGATCTTATTAGAAGGTTGGGGGAGGCGAATGATTTACCATGGGTGTGTGGCGGTGACTTTAATGAGATCATGTTTAACAGCGAGAAGAAGGGGGGAGCTTTTAAGGAGCAGCGAGTGCTAGACGCTTTTGGGGAGGCAATGGAATATGCTAATCTTTATGACTTGGGGTTCAAGGGATATAGCTATACTTGGTGGAACGGACGTGAAGGACTAAGCAGCATTGAAGAAAGACTCGATCGATATGTGGCAAATGAGAGCTGGTTGAGTTTGTTCCCTTTGGCAGAAGTACACCATATCGATGAGGCGTTATCAGACCACCTTCCAATTATGCTTCACTTACACACCCAAGGCCGAGCTCCAAAGATGAGAGGTAAGAGAGGCTTCCGCTTTGAGAATATGTGGGCATTACATGAAGGTTGCGAAGATGTCATCAAGAAGGCGTGGTTACATGACAATATACATGGGGACTTAGATGAGTGGAATGCAAAGAGTAAAAGGTGCAAGGAGGCCCTTGCTACTTGGAATCAAGAGGTGTTTGGGAATGTGCAAAAACAAATCAAGGCAAAACAAAGAGAAGTGAATAAAGCTCCTGATCGTGAATCCCGCGGCAGTCTTCTGAAGGAAATTAGAGAGCTTCGGAGACGGGAGGAAGTATTGTGGTGGCAAAGAGCGAAGTCGGATTTTTTGAAACATGGAGATTCTAATACTTCATGGTTTCACGAGAAAGCAAATGCTCGACGACGTCGCAACTACATCTCAAAGCTTCAAGGCTTGGATGGAAATGTGGTTTCTCGAGAGGAGGATTTCCCACATGTAGTTTTGTCTTTCTTTGAAGATATATACAAGTCAGAGGGTTCACATGATCTTGATAAAGTGCTGGAACATGTACCAATGAGAGTCACTGGCGAGATGAATGCGGCACTGTGCAGACCCTACACTGGGGAGGAAATCTTCGAGGCGTTACGACACATGCACCCTAGCAAAGCCCCAGGGTCTGACGGTGAACTTCAGGGACATAAGATCGCCCAAGGAGCTCCTACTATCTCACACCTATTGTTTGCAGATGACTCCATAATCTTCGCCAAATCCAATGAGGAACAAGCGCGGAAGCTAGAAGAAATCCTTCAAGTCTATGAGAAAGCATCAGGACAGCAAGTCAACAAAGCCAAAACCACGGTTTCATATGGTAGAGGGGTGCCGACATCTACAAGACAAAGTATTTGTGAAGCTTTGGGAATCTCGGAGGTAGAATCACAAGACAAATATTTGGGGTTGCCAACTATGATTGGTCGCTCGAAGAAACGAGCCTTTCAACCTATCAAAGACCGTATCCAAAAACGACTCCAAGGGTGGATGAATAAATATCTCTCATGGTCGGGTAAGGAAGTTCTCATAAAGGCCGTGGCCCAAGCAATTCCTTCCTATGCCATGGGTATTTTTAAATTCCCCGCGGAGTTTTGTGAAGAAATTAACGGACTCATTAGAAGTTTTTGGTGGGGTCACAAGGATGGAAAGCGGAAGATTCATTGGGTGAAGTGGAACTCTCTATGCAAGACAAAATCTGATGGTGGGCTAGGCTTTCGAGATATTGGAGCTTTCAACGATGCTCTCTTGGCAAAGCAAGTGTGGAGGTTGATAGTTGAGCCAAACTCTCTATGTGCCCGGGTAATTAGAGCAAGATACTATCCACATGGCGATATTAACCATGCAGACTTGGGCGGACGTCCGAGCTACGTATGGCGAAGCCTGTGGGGAGCGCGAAGAACGGTGCAGCAGGGATTGAGGTGGGTTATTGGTGATGGATGTTCTGTTCGGGTTTGGCAAGACCCTTGGGTGCCGAGGCCGAATACTTTTCGTCTTGTAACACCGGTAGGTTCTAACGACCCGGCCATGTTGGTGAGTTCACTCATAGACAAGGAGCTGGGTACTTGGAATGTGGACTTAATCAGAAGGTTGTTCCTCCCTATTGATGCAGAGGCTATCATCAACATACCACTATGCACAAGATGGCCTATGGACCGAATCATATGGCACTACAATCCCACAGGGAACTACTCGGTGAAGTCAGGTTATTGGACCATAATGAACCGAAGACAAGCTCAAGAGGCTTCACCTAGCACTACGGGGAACAACAAGCTTTGGAAATCTATTTGGAAGCTGGATGTCCCACCCCGAGTAAGGAATTTTGGATGGCGAGCTGTAAAACATGCACTACCAACCAAACAAAACATTGGGTGCAGGATAGATCATTATGGAGTGCAATGCCAACTATGCGGAGCACCAGAGGATACAGACATCCATGCACTCATGGAATGCCGAGTTTCCGTTTCACAGTGGGAGAGGAGTGGGTGGAGTCCGGAATTGTGGAAAGGGGATGTTCTGTCTATTAGAGACTGGTGGGAAAAGGTTCTGAGCAGCCCAGGTATGGATGACTTTGGGGCTTTCTTGACTACTATTTGGGCAATCTGGAACGAGAGATGCAAGTTATTATATGAAGAGGACTATGTGGAGAGTGAGGGGATTTGTGAGCATGCAAGAGCTTTCTTGAGAAGTTATAGGGAAGCTAAAAGAAGGGATGACGTGGTACAACCACCTATGAAGTCAGTGTGGACAACACCTAGTGCAGGAACTTGGAAACTCAATTGTGATGCGGGTCAACTAGGGGGAGAAGGAATAGGATGGGGATTTGTCATTAGAGATTCAACTGGAGAAGTGGTGGCCACGGGTGTAAGGCAGAAGGAAGGTCTTTTTGATCCTGAATTAGAGGAGGCTAGAGCGATGGAGTTTGGGATGAGAATGGAGTGGGAGGCAGGTTACAGGAACATCATAGTGGAGAATGACTGTGCTTCTCTAATCTCAAAGCTCAAACAAGGCTTGTCCATGCGGTCAATGATGGGTTTTGTGCTTGATGAAATTTTTTCACTTGCTTTAAGTTTTGATTTTATCAGTTGGTCTTTTGTTCGTCGGGAGGGCAATAGTGTAGCCCACAATATAGCTAAGCTCCAACCCTTTGTGGGGGGAGATAGAATATGGCTAGAGGATATGCCGGATCACATTATCAATTTGGCAAATCAAGATCTATGTAACCAATTCAACGATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_74738.p1 GENE.S_Transcript_74738~~S_Transcript_74738.p1 ORF type:complete len:1155 (+),score=168.53,RVT_3|PF13456.2|2.4e+03,RVT_3|PF13456.2|2.5e-16,zf-RVT|PF13966.2|9.9e+03,zf-RVT|PF13966.2|2.7e-14,Exo_endo_phos|PF03372.19|2.3e-06,Exo_endo_phos|PF03372.19|3.2e+02,RVT_1|PF00078.23|5e-06 S_Transcript_74738:454-3918(+)
MSLLCLNCRGLGDPRAVSGLQGLLRRFKPNLVFLSETKLNGGETTSLLCKLKEYKGSFVDGVGRAGGLALLWAEEWEVIVRSSSLNHIDVLVDTREEEEARPWRFTGIYGWPEHHNKIHTCDLIRRLGEANDLPWVCGGDFNEIMFNSEKKGGAFKEQRVLDAFGEAMEYANLYDLGFKGYSYTWWNGREGLSSIEERLDRYVANESWLSLFPLAEVHHIDEALSDHLPIMLHLHTQGRAPKMRGKRGFRFENMWALHEGCEDVIKKAWLHDNIHGDLDEWNAKSKRCKEALATWNQEVFGNVQKQIKAKQREVNKAPDRESRGSLLKEIRELRRREEVLWWQRAKSDFLKHGDSNTSWFHEKANARRRRNYISKLQGLDGNVVSREEDFPHVVLSFFEDIYKSEGSHDLDKVLEHVPMRVTGEMNAALCRPYTGEEIFEALRHMHPSKAPGSDGELQGHKIAQGAPTISHLLFADDSIIFAKSNEEQARKLEEILQVYEKASGQQVNKAKTTVSYGRGVPTSTRQSICEALGISEVESQDKYLGLPTMIGRSKKRAFQPIKDRIQKRLQGWMNKYLSWSGKEVLIKAVAQAIPSYAMGIFKFPAEFCEEINGLIRSFWWGHKDGKRKIHWVKWNSLCKTKSDGGLGFRDIGAFNDALLAKQVWRLIVEPNSLCARVIRARYYPHGDINHADLGGRPSYVWRSLWGARRTVQQGLRWVIGDGCSVRVWQDPWVPRPNTFRLVTPVGSNDPAMLVSSLIDKELGTWNVDLIRRLFLPIDAEAIINIPLCTRWPMDRIIWHYNPTGNYSVKSGYWTIMNRRQAQEASPSTTGNNKLWKSIWKLDVPPRVRNFGWRAVKHALPTKQNIGCRIDHYGVQCQLCGAPEDTDIHALMECRVSVSQWERSGWSPELWKGDVLSIRDWWEKVLSSPGMDDFGAFLTTIWAIWNERCKLLYEEDYVESEGICEHARAFLRSYREAKRRDDVVQPPMKSVWTTPSAGTWKLNCDAGQLGGEGIGWGFVIRDSTGEVVATGVRQKEGLFDPELEEARAMEFGMRMEWEAGYRNIIVENDCASLISKLKQGLSMRSMMGFVLDEIFSLALSFDFISWSFVRREGNSVAHNIAKLQPFVGGDRIWLEDMPDHIINLANQDLCNQFND*

Click here to download the sequence:
Link to NCBI Protein BLAST