Transcript Information: S_Transcript_74807.p1


Annotated TAIR IDATCG00170.1
Annotated Gene NameDNA-directed RNA polymerase family protein
Annotated Gene Symbol(s)RPOC2
Annotation TypeOrtholog
Chromosome PositionchrC:15938-20068 | Reverse length=1376
E-Value4.4E-173
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 144.381093236316
Replicate 24.9965729292019
Replicate 311.06564165016
Condition 2: 8 Hour
Replicate 112.168016828011
Replicate 220.726859769159
Replicate 326.331341159095
Condition 3: 24 Hour
Replicate 17.9669575083343
Replicate 26.4658521261932
Replicate 316.839423764592


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_74807.p1 GENE.S_Transcript_74807~~S_Transcript_74807.p1 ORF type:5prime_partial len:340 (-),score=8.07,RNA_pol_Rpb1_5|PF04998.13|5.8e-07 S_Transcript_74807:2012-3031(-)
AATAAATTGTCCAAGATGAATTTTTGTGAAAATGTATGTATAGCAAAAAATGGACCGTACTTAAAATCGGGTCAAGTTCTAATTGTTCAATTTGACTCTGTAGTAATAAGATCGGCTAAGCCTTATTTGGCCACCCCAGGGGCAACAGTTCATGGTCATTATGGAGAAATCATTTATGAAGGGGATACGTTAGTTACATTTATATATGAAAAATCGAGGTCCGGTGATATAACGCAAGGCCTTCCAAAAGTAGAACAAGTGTTAGAAGTTCGTTCGATTGGTTCAATATCGATGAATTTAGAAAAGAGGATTAATGGTTGGAACGAACTTCTAACAAGAATTCTTGGAATTCCTTGGGGATTCTTGATTGGAGCTGAGCTAACTATAGCGCAAAGTCGTATTTCTTTGGTTAATAAAATCCAAAAGGTTTATCGATCCCAGGGGGTGCAGATCCATAATAGGCATATAGAAATTATTGTACGTCAAATAACATCAAAAGTCTTGGTTTCAGAAGATGGAATGTCTAATGTTTTTTTGCCCGGAGAACTAATTGGATTGTTGCGCGCGGAACGAACGGGGCGGGCTTTAGAAGAAGCAATCTGTTACCGAGCTATCTTATTGGGAATAACGAGAGCATCTCTAAATACTCAAAGTTTTATATCCGAAGCAAGTTTTCAAGAAACTGCTCGAGTTTTAGCAAAAGCTGCTCTCCGAGGCCGTATGGATTGGTTGAAAGGATTAAAAGAAAATGTTGTTCTGGGGGGGATGATACCCGTTGGTACGGGATTTAAAGGATTCGTGCATCGTTCAAGTCAACATCAGAACATTCCCTTGAAAACAACAAAAAGAATCTATTCGAGGGAAAAATGGGAGATATTTTGTTTTACCACAGAGAATTATTTGATTCTTGGCTTTCAAAGAATTTACATGATAAATCAAAACAACAATGATTTCTGGGATTTAATAGAAAAGATTTCTCTTTTTTATTTTCTCGATATTTGTATTTGTTATGGTTATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_74807.p1 GENE.S_Transcript_74807~~S_Transcript_74807.p1 ORF type:5prime_partial len:340 (-),score=8.07,RNA_pol_Rpb1_5|PF04998.13|5.8e-07 S_Transcript_74807:2012-3031(-)
NKLSKMNFCENVCIAKNGPYLKSGQVLIVQFDSVVIRSAKPYLATPGATVHGHYGEIIYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIGSISMNLEKRINGWNELLTRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGRMDWLKGLKENVVLGGMIPVGTGFKGFVHRSSQHQNIPLKTTKRIYSREKWEIFCFTTENYLILGFQRIYMINQNNNDFWDLIEKISLFYFLDICICYGY*

Click here to download the sequence:
Link to NCBI Protein BLAST