Transcript Information: S_Transcript_74859.p1


Annotated TAIR IDAT5G47010.1
Annotated Gene NameRNA helicase, putative
Annotated Gene Symbol(s)UPF1, LBA1, ATUPF1
Annotation TypeOrtholog
Chromosome Positionchr5:19072009-19078856 | Forward length=1254
E-Value5.7E-93
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.7832207638247
Replicate 25.6238483185822
Replicate 32.8929782091923
Condition 2: 8 Hour
Replicate 15.3313475792832
Replicate 23.838307364659
Replicate 34.5975357579372
Condition 3: 24 Hour
Replicate 14.2833104883518
Replicate 25.6659528940868
Replicate 33.9563991223711


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_74859.p1 GENE.S_Transcript_74859~~S_Transcript_74859.p1 ORF type:3prime_partial len:204 (-),score=50.76 S_Transcript_74859:1-609(-)
ATGGCTGAGATAGTGGGGCACCATTACAAGGAACATGAATGCTTGGTGGAAGGACCTCTCAACAACTTGAAGCAAAGTATGGTTCAATTTCAGAAGCCCAAGAAGATCTACAATGATCGCAGACTTTTCTATGGTGCTGCAGCCGGTGTTGTGCCCAATGATAACTTTGCGTCAGTTTCAACGAGTGGTTCAAATGCTGATAGAAGAGGCGGTCGCGCTAGAGGTTATATGCCTCCTGGTTCACCCAATGGTACCCACAAACCAGGAGTCCATCCGGCTGGATTTCCTATGCCTCGAGTTCCTCTTGCTCCTTATCATGGTGCCCCACCGTCTCAGCCATATGCTATTCCCTCCCGAGGAGCTATACATGGTCCTATTGGAGCTGTTCCTCAAGTACCTCAGCCTGGGAGCCGTGGTTTTGGTGCAGGTCGTGGCAGTGCTGCTCCTATTGGCAGTCACCTGCCACACCATCAGGGCTCACAGCAACCTGTTGGAAACCTTGGGCCTAGTTTCAATTTTCCTCTGGAAAATCCAAATAGTCAACCTTCTGTTGGGGGTCCATTGTCCCAACCTGGATTCGTTTCTAATCAGATGCCTGTTCAAGGGCCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_74859.p1 GENE.S_Transcript_74859~~S_Transcript_74859.p1 ORF type:3prime_partial len:204 (-),score=50.76 S_Transcript_74859:1-609(-)
MAEIVGHHYKEHECLVEGPLNNLKQSMVQFQKPKKIYNDRRLFYGAAAGVVPNDNFASVSTSGSNADRRGGRARGYMPPGSPNGTHKPGVHPAGFPMPRVPLAPYHGAPPSQPYAIPSRGAIHGPIGAVPQVPQPGSRGFGAGRGSAAPIGSHLPHHQGSQQPVGNLGPSFNFPLENPNSQPSVGGPLSQPGFVSNQMPVQGP

Click here to download the sequence:
Link to NCBI Protein BLAST