Transcript Information: S_Transcript_74865.p4


Annotated TAIR IDAT5G47010.1
Annotated Gene NameRNA helicase, putative
Annotated Gene Symbol(s)UPF1, LBA1, ATUPF1
Annotation TypeOrtholog
Chromosome Positionchr5:19072009-19078856 | Forward length=1254
E-Value1.8E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.359207844284
Replicate 212.376686824947
Replicate 310.121013704415
Condition 2: 8 Hour
Replicate 111.182826629716
Replicate 216.915300191013
Replicate 318.196455272545
Condition 3: 24 Hour
Replicate 111.188842763475
Replicate 214.64856114081
Replicate 311.073092665661


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_74865.p4 GENE.S_Transcript_74865~~S_Transcript_74865.p4 ORF type:5prime_partial len:82 (+),score=16.44,AAA_12|PF13087.2|2.1e-11 S_Transcript_74865:2-247(+)
GCTCTTAGACAGCAACTTTACAAAGAAATTGAGGTGGGGAGTGTTGATTCATTCCAGGGCAGAGAAAAGGATTACATTATCTTGTCTTGTGTCAGGAGTAATGAGCATCTGGTTGGCTCTGTTGTCTTTTGTCTTGGTTATGTATGTGGTCTTTCTCTGCTGTTTAATATCTTTTCATCTTTGCTGAACTTGGTTAAGAACTGTTTGAGGCTACCCTCCTCTCGCAGCCCTCCACCTTCATTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_74865.p4 GENE.S_Transcript_74865~~S_Transcript_74865.p4 ORF type:5prime_partial len:82 (+),score=16.44,AAA_12|PF13087.2|2.1e-11 S_Transcript_74865:2-247(+)
ALRQQLYKEIEVGSVDSFQGREKDYIILSCVRSNEHLVGSVVFCLGYVCGLSLLFNIFSSLLNLVKNCLRLPSSRSPPPSL*

Click here to download the sequence:
Link to NCBI Protein BLAST