Transcript Information: S_Transcript_74897.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value1E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.039467179038
Replicate 212.039201215335
Replicate 311.612093089674
Condition 2: 8 Hour
Replicate 110.952299224602
Replicate 210.937348223866
Replicate 313.052667175396
Condition 3: 24 Hour
Replicate 115.048697515743
Replicate 215.612847974817
Replicate 313.763140280323


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_74897.p1 GENE.S_Transcript_74897~~S_Transcript_74897.p1 ORF type:complete len:405 (+),score=67.62,RVT_1|PF00078.23|2.5e-16,zf-RVT|PF13966.2|6e+02,zf-RVT|PF13966.2|4e-13 S_Transcript_74897:3621-4835(+)
ATGACTTGTATTACCTCAGTTACTTATGTACTCACTATTAATGGTGAATTACAAGAAGCTTTTGGAGCAAAGAGAGTCCTGAGACAGGGTGATCCACTATCTCCTGCCCTATTTGTTATAGCTATGGAGTACCTGACAAGATGTATGAGTGAGCTGCATGATAAGAAGAAGTTCAAGTTTCATCCTAAGAGCAAGAAGGTCTCTCTTACCCACCTTTGTTTTGCTGATGACCTCATGCTATTTTCTAGAGGTGATGTTCTTTTTGCCACACACATTTATGATGCCTTTAATAAGTTTTCAAATGTTTCTGGGTTACATGCCAATATGGGGAAGAGCTGTATATATTTTGGAGGGGTGCATGAAAGTGTGCAGAAAACTATAGTTGACCAGTTAGGCTATCAAATTGGTGATATGCCTGTGAGATATCTTGGGGTTCCTTTGTCTAACAAGAAGATAACAGTGCCCCAATGTCATTCCCTTATTGAGAAAATTACTGCCAGAATTAGAACCTGGGCTGCCAAGCTTTTATCTTATGCTGGTAGAGTCCAGCTTATTAAGTCTGTCCTGTTGGGTATACAGGCATACTGGGCACAGGTGATGATGCTGCCCAGGAAGATCATCAGAGAAATTGAAAGCATTTGTCTGATATTCCTCTGGTCTGGTTCTGATAAGGAGAAAATTCATGCAAAAGTGGCTTGGAAAACAGTTTGTACTCCTAAAATTGCTGGAGGATTAAATCTCATGAACCTTTCAAATTGGAATAGAGCAACTCTATTTAAACTCTTCTGGGCTATTGATCTGAAGAAAGATGCTCTCTGGATTAAATGGGTGCATAGCTATATTATCAAAAGGGGGGATGTTATGAATATCAGCCTTCCTGATTCTTTATCCTGGATGCTCAAAACAATTTTACTGAGCAGAGAAATTTGTGGTAGAGGTCAGTTATGCACTAGAACTTCAGGGGTTACTATTAAAGATATATATAAAGTTCTTCAAGGGGACTTTGTGAAAGTTAGCTGGAGGTCATTGGTGTGCCATAACCCTTCCAGACCAAAGGCTATTTTTTCTTTGTGGTTACTTCTGCAACAAAGACTTTCAACAAAGGATAGAATTACAAAATGGAGGGTCCATTGTGACTTGCAGTGTGATTTGTGTGGAGATTATGATGAATCTCATGAGCATTTGCTATTTGGTTGTAAATTCACAAAAGACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_74897.p1 GENE.S_Transcript_74897~~S_Transcript_74897.p1 ORF type:complete len:405 (+),score=67.62,RVT_1|PF00078.23|2.5e-16,zf-RVT|PF13966.2|6e+02,zf-RVT|PF13966.2|4e-13 S_Transcript_74897:3621-4835(+)
MTCITSVTYVLTINGELQEAFGAKRVLRQGDPLSPALFVIAMEYLTRCMSELHDKKKFKFHPKSKKVSLTHLCFADDLMLFSRGDVLFATHIYDAFNKFSNVSGLHANMGKSCIYFGGVHESVQKTIVDQLGYQIGDMPVRYLGVPLSNKKITVPQCHSLIEKITARIRTWAAKLLSYAGRVQLIKSVLLGIQAYWAQVMMLPRKIIREIESICLIFLWSGSDKEKIHAKVAWKTVCTPKIAGGLNLMNLSNWNRATLFKLFWAIDLKKDALWIKWVHSYIIKRGDVMNISLPDSLSWMLKTILLSREICGRGQLCTRTSGVTIKDIYKVLQGDFVKVSWRSLVCHNPSRPKAIFSLWLLLQQRLSTKDRITKWRVHCDLQCDLCGDYDESHEHLLFGCKFTKD*

Click here to download the sequence:
Link to NCBI Protein BLAST