Transcript Information: S_Transcript_750.p1


Annotated TAIR IDAT3G55530.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)SDIR1
Annotation TypeOrtholog
Chromosome Positionchr3:20595300-20597188 | Reverse length=273
E-Value5.3E-135
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.806506141755
Replicate 215.804980155747
Replicate 315.156575835977
Condition 2: 8 Hour
Replicate 113.182968559682
Replicate 216.595844081834
Replicate 316.897653737767
Condition 3: 24 Hour
Replicate 116.046059873091
Replicate 216.730013636358
Replicate 318.526738072122


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_750.p1 GENE.S_Transcript_750~~S_Transcript_750.p1 ORF type:complete len:275 (+),score=65.55,zf-RING_2|PF13639.2|3.2e-13,zf-RING_11|PF17123.1|2.1e-10,zf-RING_11|PF17123.1|9.5e+03,zf-C3HC4|PF00097.21|1e-08,zf-rbx1|PF12678.3|1.9e-06,zf-C3HC4_2|PF13923.2|8.3e-07,zf-C3HC4_3|PF13920.2|9.6e-06,zf-RING_5|PF14634.2|1.5e-05 S_Transcript_750:234-1058(+)
ATGAGTTTTGTTTTTCGCGGTAGCAGAGGAGATATTGAAAATGGGTTTACAGGAATTATTCCTGGACGACGCCCACTGCAGAGAATTCAGCATGTTCGACCTGTGAATACAAATTCATTGGCTTTTCTTGTCACTGTTCTTTTGCTGTTCACAATCTTGAATTCTCATCAGCTGTCACCTAACTTTTTGCTCTGGCTGGTTCTTGGTGTATTTCTGATCGCCACAAGCTTAAGGATGTATGCAACTTGTCAACAATTACAAGCACAAGCTCAAGCTCATGCTGCAGCTGCCAGTGGCTTGTTCGGACATACAGAGTTGCACTTGCAGATGCCACCATCCATAGCTTTAGCGACCAGAGGGCGTCTACAGGGATTAAGGCTTCAGCTTGCACTTCTGGATCGTGAATTTGATGATCTAGATTATGAAACTTTAAGAGCGTTGGACTCTGACAATGGTCCCTCCACTCCTTCAATGAGCGAGGAAGAGATAAATGCCTTACCTGTCCACAAGTATAAAGTTACAGGGCCAGAAAGTGACAATACAGCATTGCAAGAGGCTTCATCTTCGTCACCTTCCTCTGAGGCAAAGCAAGATGGTGGGAGTGCAAAGGGCTTTGAAGATGATCTGACATGTACCATTTGTTTGGATCAAGTGAAGAGGGGAGATCTCCTCCGTACCTTGCCATGTTTGCATCAGTTCCATGCCAATTGCATTGATCCATGGCTGCGGCAGCAGGGGACATGCCCTGTGTGCAAACTGAGAGTAGGTTCAGAAATGCAAGATGGATTGGACAATGCAGCAGCAGAAATAGATGATATGGTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_750.p1 GENE.S_Transcript_750~~S_Transcript_750.p1 ORF type:complete len:275 (+),score=65.55,zf-RING_2|PF13639.2|3.2e-13,zf-RING_11|PF17123.1|2.1e-10,zf-RING_11|PF17123.1|9.5e+03,zf-C3HC4|PF00097.21|1e-08,zf-rbx1|PF12678.3|1.9e-06,zf-C3HC4_2|PF13923.2|8.3e-07,zf-C3HC4_3|PF13920.2|9.6e-06,zf-RING_5|PF14634.2|1.5e-05 S_Transcript_750:234-1058(+)
MSFVFRGSRGDIENGFTGIIPGRRPLQRIQHVRPVNTNSLAFLVTVLLLFTILNSHQLSPNFLLWLVLGVFLIATSLRMYATCQQLQAQAQAHAAAASGLFGHTELHLQMPPSIALATRGRLQGLRLQLALLDREFDDLDYETLRALDSDNGPSTPSMSEEEINALPVHKYKVTGPESDNTALQEASSSSPSSEAKQDGGSAKGFEDDLTCTICLDQVKRGDLLRTLPCLHQFHANCIDPWLRQQGTCPVCKLRVGSEMQDGLDNAAAEIDDMV*

Click here to download the sequence:
Link to NCBI Protein BLAST