Transcript Information: S_Transcript_75299.p1


Annotated TAIR IDAT3G27960.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:10380513-10382593 | Reverse length=663
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.085701712918
Replicate 212.267277181357
Replicate 314.565425039745
Condition 2: 8 Hour
Replicate 15.9876268801909
Replicate 28.3546322720971
Replicate 39.1690575451579
Condition 3: 24 Hour
Replicate 16.4356295760672
Replicate 28.5263578821113
Replicate 38.3375776110965


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_75299.p1 GENE.S_Transcript_75299~~S_Transcript_75299.p1 ORF type:complete len:723 (+),score=166.56,TPR_12|PF13424.2|0.00063,TPR_12|PF13424.2|1.2e-07,TPR_12|PF13424.2|0.00014,TPR_12|PF13424.2|0.91,TPR_12|PF13424.2|9.3e-15,TPR_12|PF13424.2|1.6,TPR_12|PF13424.2|1e-05,TPR_12|PF13424.2|3.8e-09,TPR_10|PF13374.2|0.0028,TPR_10|PF13374.2|0.57,TPR_10|PF13374.2|0.91,TPR_10|PF13374.2|1.8e+03,TPR_10|PF13374.2|19,TPR_10|PF13374.2|16,TPR_10|PF13374.2|1.8e+02,TPR_10|PF13374.2|1.1e+03,TPR_10|PF13374.2|0.0085,TPR_10|PF13374.2|0.00011,TPR_2|PF07719.13|2.8e+02,TPR_2|PF07719.13|0.93,TPR_2|PF07719.13|1.7,TPR_2|PF07719.13|0.78,TPR_2|PF07719.13|0.028,TPR_2|PF07719.13|4.6,TPR_2|PF07719.13|12,TPR_2|PF07719.13|7.7,TPR_2|PF07719.13|17,TPR_2|PF07719.13|1.8,TPR_1|PF00515.24|3.6e+03,TPR_1|PF00515.24|61,TPR_1|PF00515.24|0.1,TPR_1|PF00515.24|1.4,TPR_1|PF00515.24|0.077,TPR_1|PF00515.24|0.0015,TPR_1|PF00515.24|0.025,TPR_1|PF00515.24|28,TPR_1|PF00515.24|5.2,TPR_1|PF00515.24|8.7e+02,TPR_1|PF00515.24|31,TPR_11|PF13414.2|13,TPR_11|PF13414.2|0.0011,TPR_11|PF13414.2|0.00021,TPR_11|PF13414.2|3.5e-07,TPR_11|PF13414.2|0.072,TPR_11|PF13414.2|0.11,TPR_7|PF13176.2|0.015,TPR_7|PF13176.2|4e+02,TPR_7|PF13176.2|0.41,TPR_7|PF13176.2|0.49,TPR_7|PF13176.2|0.082,TPR_7|PF13176.2|1.6,TPR_7|PF13176.2|1.9e+03,TPR_7|PF13176.2|6.5e+03,TPR_7|PF13176.2|3.1e+02,TPR_7|PF13176.2|0.097,TPR_8|PF13181.2|4.8e+03,TPR_8|PF13181.2|0.008,TPR_8|PF13181.2|1.6e+02,TPR_8|PF13181.2|1.3,TPR_8|PF13181.2|0.0033,TPR_8|PF13181.2|0.008,TPR_8|PF13181.2|11,TPR_8|PF13181.2|6e+03,TPR_8|PF13181.2|6.2e+02,TPR_8|PF13181.2|11,TPR_14|PF13428.2|3e+02,TPR_14|PF13428.2|1.9e+03,TPR_14|PF13428.2|4.8,TPR_14|PF13428.2|6e+02,TPR_14|PF13428.2|1.7e+02,TPR_14|PF13428.2|1.9e+02,TPR_14|PF13428.2|23,TPR_14|PF13428.2|8.6e+03,TPR_14|PF13428.2|1.5e+03,TPR_14|PF13428.2|66,TPR_19|PF14559.2|1.8e+02,TPR_19|PF14559.2|0.093,TPR_19|PF14559.2|7,TPR_19|PF14559.2|1.4e+03,TPR_19|PF14559.2|15,TPR_19|PF14559.2|0.11,TPR_16|PF13432.2|3.9e+02,TPR_16|PF13432.2|30,TPR_16|PF13432.2|8.9e+02,TPR_16|PF13432.2|0.47,TPR_16|PF13432.2|3.9e+03,TPR_16|PF13432.2|5.5e+03,TPR_16|PF13432.2|2.7,RPN7|PF10602.5|56,RPN7|PF10602.5|66,RPN7|PF10602.5|0.47 S_Transcript_75299:353-2521(+)
ATGGCTGGAGCTGAAATAAGTGGAGAGAACAAAAGGAGGAGCTCCAGTCTGAGTGGAGACATAAGCCATTACAAAAGAAGCCTCAAGCAAAATGCATCACCCAAAACTCCTTTGAGCCCTGAAAGCCCCAGCTCTGGCTCTATTGATCTAACCATTGATGAAACTGTCGACAACTCCATCGAGTTGTTGTACCAAAATATTTGTGATATGGCAAGCTCCAATGACACCCACTCAATATGTAGCATCACAACCTATGGCAATGAATCGAGAATCGATTCTGAGCTACTACATCTTGTGGGAGCTGATACCGATACAGAGGAAGATGTAAAAGAGGTGATCAAGGAGGAGCATAAGGAAGTCTCGGATGACATAAATGATTCGCCACCGCAAAGTAAAAAGAAGATGGGAAAGACTATGAAGGGGGGTATCCATTCTAGAGTTAAGTCACTACCTTCTGTGACCTCGAAATTGGTATGTAACAGCCCTAATGTCAAAAGCATGAGCCCAAAGCCTCCGATTGGTAAGAAGAATGCCGTGAAGAGTTCAAGAAGTTCATTTTTGTGTACTTCTCCATTTCAAGATGAGAAGAATGGAAATGGTAAGAAATCTGGTAAGAAAATGAAGGAGAGTCCGTACTTGGGGACGTATTTGCTTAAGAAAGCTAGGGATGTGATATCAGCTGGAGATGATCCCCAAAGAGCATTTGAGCTTGCCCTTCGAGCCAAACAATCATTTGAGAATTGTGGCAGTGATAAGCCAAACTTAGATTATGTTATGTGCTTGCATGTTTTGGCTTCAATGTATTGTAGCTTGGGCCAATGCAATGAAGCCATTCCTCTTCTACAACGTTCCATTGAAGTACCAAAACCCGAGCTAGGCCAAATGCATGCCCTTGCAAAATTTGTTGGGTGTATGCAGTTAGGTGATATATATGCAATGAAGGGCCAGATTGAGAACTCAATTGTGCAATACAAAAATGCTTTAGAGGTTCAAAAACAAGTTCTTGGAGAGCAAGACCCTCGTTTTGGGGAGACTTGTCGATATGTGGCAGAAGCTCATGTTCAAGCATTTGAATTTGATGAGGCTGAAAAGTTCTGTCAGATGGCTCTTGACATCCATAAAGCTAACAAAGGGTCTCCGATTTCCATTGAGGAGGCTGCAGATCGCAGATTGATGGGCCTCATTTGTGAATCGAAGGGAAATTATGAAGCTGCCCTCGAACACTATGTCTTAGCTAGCACTGCCCTGAGTAATAGTGGTCAGGAAGCAGACACTGCAGCTCTTGACTGCAATATTGGTGATGCATACTTAACCTTGGCTCGATATGATGAGGCAATTTTCTCTTACCAAAAATCACTCACTGAACTCAAGTCATGTAAAGGAGAGAACCATCCCGCCGTTGGAACTGTCTTTGTTCGTTTGGCTGAGCTCTACAACAAAATCGGAAAGTTTACTGACTCCAAGTCCTATTGTGAAAAGGCCCTTCGGATATACGACAAAGCACCTCCTGGTTCTAATAATGAGGACATTAATAGTGGTTTAATTGATCTGTCTGCCATCTATGAATCAATGAATGAGCTAGATCAGGCCTTCAGTTTGTTATCCAAGGCGGTTGATCTGTATGGTGATTCGCCCGGCCAACAATGCATGATTGCTGGGATTGAGGCTCAAATGGGGGTTATACATTACATGCAAGGAAAGTATGCTGACTCTTATGACTGCCTTCACAGTTCCATCTCAAAGTTCCAGGCTTCAGGAGAAAAGAAATCTTCAATTTATGGAATCACCTTAAATCAATTAGGTCTTGCCTGTGTACAGCTCTATTCAATCGGTGAGGCTGCAGAACTCTTTGAGGAAGCCAAGAGTGTTTTGGAGAAAGAATATGGATTGTATCACCCTGATACTCTTGCGGTTTACAGCAATCTTTCAGGCACCTATGATGCTCTCGGAAGATGGGATGAAGCAATCGATCTATTGGACTACGTTGTGGGGATGCGAGAAGAGAAGCTTGGAACAGCTGATCCTGTTGTCGATGATGAGAAGAGGAGATTGTCAGAGTTACTGAAAGAAGCAAGAAGAGCAAGGAGAAGAAAGTCTAGATCTCTAGAAACACTTCTTGACAAAAACTCCCAGATCTTGATAAAGAATGTTGCTGGGCCAATAATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_75299.p1 GENE.S_Transcript_75299~~S_Transcript_75299.p1 ORF type:complete len:723 (+),score=166.56,TPR_12|PF13424.2|0.00063,TPR_12|PF13424.2|1.2e-07,TPR_12|PF13424.2|0.00014,TPR_12|PF13424.2|0.91,TPR_12|PF13424.2|9.3e-15,TPR_12|PF13424.2|1.6,TPR_12|PF13424.2|1e-05,TPR_12|PF13424.2|3.8e-09,TPR_10|PF13374.2|0.0028,TPR_10|PF13374.2|0.57,TPR_10|PF13374.2|0.91,TPR_10|PF13374.2|1.8e+03,TPR_10|PF13374.2|19,TPR_10|PF13374.2|16,TPR_10|PF13374.2|1.8e+02,TPR_10|PF13374.2|1.1e+03,TPR_10|PF13374.2|0.0085,TPR_10|PF13374.2|0.00011,TPR_2|PF07719.13|2.8e+02,TPR_2|PF07719.13|0.93,TPR_2|PF07719.13|1.7,TPR_2|PF07719.13|0.78,TPR_2|PF07719.13|0.028,TPR_2|PF07719.13|4.6,TPR_2|PF07719.13|12,TPR_2|PF07719.13|7.7,TPR_2|PF07719.13|17,TPR_2|PF07719.13|1.8,TPR_1|PF00515.24|3.6e+03,TPR_1|PF00515.24|61,TPR_1|PF00515.24|0.1,TPR_1|PF00515.24|1.4,TPR_1|PF00515.24|0.077,TPR_1|PF00515.24|0.0015,TPR_1|PF00515.24|0.025,TPR_1|PF00515.24|28,TPR_1|PF00515.24|5.2,TPR_1|PF00515.24|8.7e+02,TPR_1|PF00515.24|31,TPR_11|PF13414.2|13,TPR_11|PF13414.2|0.0011,TPR_11|PF13414.2|0.00021,TPR_11|PF13414.2|3.5e-07,TPR_11|PF13414.2|0.072,TPR_11|PF13414.2|0.11,TPR_7|PF13176.2|0.015,TPR_7|PF13176.2|4e+02,TPR_7|PF13176.2|0.41,TPR_7|PF13176.2|0.49,TPR_7|PF13176.2|0.082,TPR_7|PF13176.2|1.6,TPR_7|PF13176.2|1.9e+03,TPR_7|PF13176.2|6.5e+03,TPR_7|PF13176.2|3.1e+02,TPR_7|PF13176.2|0.097,TPR_8|PF13181.2|4.8e+03,TPR_8|PF13181.2|0.008,TPR_8|PF13181.2|1.6e+02,TPR_8|PF13181.2|1.3,TPR_8|PF13181.2|0.0033,TPR_8|PF13181.2|0.008,TPR_8|PF13181.2|11,TPR_8|PF13181.2|6e+03,TPR_8|PF13181.2|6.2e+02,TPR_8|PF13181.2|11,TPR_14|PF13428.2|3e+02,TPR_14|PF13428.2|1.9e+03,TPR_14|PF13428.2|4.8,TPR_14|PF13428.2|6e+02,TPR_14|PF13428.2|1.7e+02,TPR_14|PF13428.2|1.9e+02,TPR_14|PF13428.2|23,TPR_14|PF13428.2|8.6e+03,TPR_14|PF13428.2|1.5e+03,TPR_14|PF13428.2|66,TPR_19|PF14559.2|1.8e+02,TPR_19|PF14559.2|0.093,TPR_19|PF14559.2|7,TPR_19|PF14559.2|1.4e+03,TPR_19|PF14559.2|15,TPR_19|PF14559.2|0.11,TPR_16|PF13432.2|3.9e+02,TPR_16|PF13432.2|30,TPR_16|PF13432.2|8.9e+02,TPR_16|PF13432.2|0.47,TPR_16|PF13432.2|3.9e+03,TPR_16|PF13432.2|5.5e+03,TPR_16|PF13432.2|2.7,RPN7|PF10602.5|56,RPN7|PF10602.5|66,RPN7|PF10602.5|0.47 S_Transcript_75299:353-2521(+)
MAGAEISGENKRRSSSLSGDISHYKRSLKQNASPKTPLSPESPSSGSIDLTIDETVDNSIELLYQNICDMASSNDTHSICSITTYGNESRIDSELLHLVGADTDTEEDVKEVIKEEHKEVSDDINDSPPQSKKKMGKTMKGGIHSRVKSLPSVTSKLVCNSPNVKSMSPKPPIGKKNAVKSSRSSFLCTSPFQDEKNGNGKKSGKKMKESPYLGTYLLKKARDVISAGDDPQRAFELALRAKQSFENCGSDKPNLDYVMCLHVLASMYCSLGQCNEAIPLLQRSIEVPKPELGQMHALAKFVGCMQLGDIYAMKGQIENSIVQYKNALEVQKQVLGEQDPRFGETCRYVAEAHVQAFEFDEAEKFCQMALDIHKANKGSPISIEEAADRRLMGLICESKGNYEAALEHYVLASTALSNSGQEADTAALDCNIGDAYLTLARYDEAIFSYQKSLTELKSCKGENHPAVGTVFVRLAELYNKIGKFTDSKSYCEKALRIYDKAPPGSNNEDINSGLIDLSAIYESMNELDQAFSLLSKAVDLYGDSPGQQCMIAGIEAQMGVIHYMQGKYADSYDCLHSSISKFQASGEKKSSIYGITLNQLGLACVQLYSIGEAAELFEEAKSVLEKEYGLYHPDTLAVYSNLSGTYDALGRWDEAIDLLDYVVGMREEKLGTADPVVDDEKRRLSELLKEARRARRRKSRSLETLLDKNSQILIKNVAGPII*

Click here to download the sequence:
Link to NCBI Protein BLAST