Transcript Information: S_Transcript_75678.p1


Annotated TAIR IDAT5G48450.1
Annotated Gene NameSKU5 similar 3
Annotated Gene Symbol(s)sks3
Annotation TypeOrtholog
Chromosome Positionchr5:19632791-19635612 | Reverse length=621
E-Value2.5E-291
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.19517151184
Replicate 25.6883803647368
Replicate 35.0267494297843
Condition 2: 8 Hour
Replicate 18.2081152417694
Replicate 28.6932966169103
Replicate 38.5184879010699
Condition 3: 24 Hour
Replicate 12.9770191128986
Replicate 23.5060040007609
Replicate 33.6230561023924


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_75678.p1 GENE.S_Transcript_75678~~S_Transcript_75678.p1 ORF type:5prime_partial len:543 (+),score=83.19,Cu-oxidase|PF00394.18|1.1e-42,Cu-oxidase|PF00394.18|2.4e+03,Cu-oxidase_3|PF07732.11|3e-36,Cu-oxidase_3|PF07732.11|2.2e+02,Cu-oxidase_3|PF07732.11|1.9e+03,Cu-oxidase_2|PF07731.10|1.5e-26 S_Transcript_75678:1-1629(+)
GTCAATGGGCAATTTCCAGGACCGATTCTCAATGTAACAACCAACTGGAATGTAGTTGTTAATGTCAGGAATAATCTTGACGAGCCATTGCTTTTAACTTGGTCTGGTGTACAACAAAGAAAAGATTCATGGCACGATGGTGTCTCGGGGACTAATTGCCCTATCCCTGCTGGCTGGAACTGGACATATGATTTTCAAGTTAAAGATCAGATAGGGAGTTTCTTTTACTTTCCTTCTCTGAGCTTTCAGAGAGCTGCTGGTGGGTATGGGGGAATAACTATAAACAACAGGGCCATAATTCCTATACCCTTTGGGACCCCAGATGGTGATGTCACTCTTTTGATCAGTGATTGGTATACAAGGAGTCATAAGGAACTCAGAAAAGATGTTGAAGACGGAAAGGACCTTGGTGTTCCTGATGGTGTGCTTTTCAATGGATTCGGTCCCTATCGGTATGACGCAGCTGTTGTTCCTGAAAACATCAATTACCTGTCGGTGAATGTTGAGCCAGGGAAGACTTATCGTATTCGGGTGTCGAATGTTGGTATCTCTACCAGCTTGAATTTCAGAATCCAGAATCACAATCTGATTCTAGTTGAGACTGAAGGCTCATATACAGCCCAGCAGAAATATACGGACATGGATATTCATGTTGGTCAATCCTACTCATTCTTAGTCACCATGGATCAGGATGCAAGAAGTGATTACTACATTGTTGCCAGCCCTCGGTTTGTCAATTCCTCTGCTTGGAGCAAAGCTACTGGTGTTGCTGTCTTGCACTACTCTAACTCTCAAGGGCCTGCTTCAGGTCCTCTTCCAGATCCTCCTAATGAGTTAGATCAATCTTACTCTATGACTCAAGCAACATCCATAAGGTGGAATCTGACTGCAAGTGGTGCTCGTCCAAATCCGCAAGGATCTTTCAGATATGGAGAAATCACAGTTACAGATGTTTATGTGATTGTCAACCGGCCTGCAGAGCTTATAAATGGGAAGTCGCATACCACTCTCAATGGCATCTCTTACTTCACACCCTCAACACCTTTATACCTCGCACAGAAGCTTAAGGTACCGGGGGTGTACAAGCTTGATTTTCCGAACAGGCCAATGAATAGACCTCCAAGGATTGACACATCACTAATAAATGCAACTTATAAAGGCTTTGTAGAGATCATACTTCAAAACAATGATACAACTGTTCATACTTATCATCTAGATGGATATGCATTCTTCGTTGTGGGTATGGGCGATGGAATATGGACAGAGAACAGCAGGTCCACTTACAACAAAGGGGATGCGGTTGCTCGTTGCACCACTCAGGTATTTCCTGGAGCATGGACTGCTGTTATGGTGTATCTTGACAACTCTGGTATTTGGAATCTCCGCGCAGAGAAATTGAACTCTTGGTATTTGGGACAGGAAGTTTATTTGAGTGTTGTGAATCCAGACAAGGACAAGACAGAAATCCCTTTGCCAGATAACACCATCTATTGTGGTGCACTCGCATCTTTACAGAGGGACCAAGCTCGGAGAATCTATTTTTCAGGTGCAAAGCAACTCGCTCATGCAAGCAAAGCTATTCTGGTTTCATTAGCCATTACATTATTTGGGTTTGCGTTCAGGTATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_75678.p1 GENE.S_Transcript_75678~~S_Transcript_75678.p1 ORF type:5prime_partial len:543 (+),score=83.19,Cu-oxidase|PF00394.18|1.1e-42,Cu-oxidase|PF00394.18|2.4e+03,Cu-oxidase_3|PF07732.11|3e-36,Cu-oxidase_3|PF07732.11|2.2e+02,Cu-oxidase_3|PF07732.11|1.9e+03,Cu-oxidase_2|PF07731.10|1.5e-26 S_Transcript_75678:1-1629(+)
VNGQFPGPILNVTTNWNVVVNVRNNLDEPLLLTWSGVQQRKDSWHDGVSGTNCPIPAGWNWTYDFQVKDQIGSFFYFPSLSFQRAAGGYGGITINNRAIIPIPFGTPDGDVTLLISDWYTRSHKELRKDVEDGKDLGVPDGVLFNGFGPYRYDAAVVPENINYLSVNVEPGKTYRIRVSNVGISTSLNFRIQNHNLILVETEGSYTAQQKYTDMDIHVGQSYSFLVTMDQDARSDYYIVASPRFVNSSAWSKATGVAVLHYSNSQGPASGPLPDPPNELDQSYSMTQATSIRWNLTASGARPNPQGSFRYGEITVTDVYVIVNRPAELINGKSHTTLNGISYFTPSTPLYLAQKLKVPGVYKLDFPNRPMNRPPRIDTSLINATYKGFVEIILQNNDTTVHTYHLDGYAFFVVGMGDGIWTENSRSTYNKGDAVARCTTQVFPGAWTAVMVYLDNSGIWNLRAEKLNSWYLGQEVYLSVVNPDKDKTEIPLPDNTIYCGALASLQRDQARRIYFSGAKQLAHASKAILVSLAITLFGFAFRY*

Click here to download the sequence:
Link to NCBI Protein BLAST