Transcript Information: S_Transcript_75741.p1


Annotated TAIR IDAT1G15820.1
Annotated Gene Namelight harvesting complex photosystem II subunit 6
Annotated Gene Symbol(s)LHCB6, CP24
Annotation TypeOrtholog
Chromosome Positionchr1:5446685-5447676 | Reverse length=258
E-Value1E-94
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11535.3927512617
Replicate 21614.7020250826
Replicate 32096.8161411315
Condition 2: 8 Hour
Replicate 1724.06808590106
Replicate 2695.16791006511
Replicate 3711.38088740358
Condition 3: 24 Hour
Replicate 11889.4367893798
Replicate 21602.1803863706
Replicate 31646.1587648406


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_75741.p1 GENE.S_Transcript_75741~~S_Transcript_75741.p1 ORF type:complete len:150 (+),score=32.81,Chloroa_b-bind|PF00504.17|4.6e-22 S_Transcript_75741:1140-1589(+)
ATGCTGGCTGTGGTGGGGATCTTTGTGGGCCAGGCCTGGAGTGGCATCCCATGGTATGAGGCTGGTGCAGCCCCAGGAGCAGTGGCCCCGTTCTCATTTGGGTCACTATTGGGTACCCAACTGTTGTTAATGGGTTGGGTTGAGAGCAAGAGATGGGTGGACTTCTTTAACCCGGACTCGCAATCAGTAGAATGGGCCACACCCTGGTCCAAAACTGCTGAGAACTTTGGGAATTCAACAGGTGATCAAGGTTACCCAGGTGGCAAGTTCTTTGACCCATTGCGCTTGGCTGGGTCTATGCAAGATGGAGTTTATGTTGCTGATAGGGAGAAGTTAGAGAGATTAAAGCTGGCTGAAATTAAGCATGCTAGAATTGCTATGTTAGCTATGCTTACCTTTTACTTTGAGGCAGGCCAAGGGAAAACTCCCCTTGCTGCTTTAGGCCTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_75741.p1 GENE.S_Transcript_75741~~S_Transcript_75741.p1 ORF type:complete len:150 (+),score=32.81,Chloroa_b-bind|PF00504.17|4.6e-22 S_Transcript_75741:1140-1589(+)
MLAVVGIFVGQAWSGIPWYEAGAAPGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPWSKTAENFGNSTGDQGYPGGKFFDPLRLAGSMQDGVYVADREKLERLKLAEIKHARIAMLAMLTFYFEAGQGKTPLAALGL*

Click here to download the sequence:
Link to NCBI Protein BLAST