Transcript Information: S_Transcript_75744.p1


Annotated TAIR IDAT1G15820.1
Annotated Gene Namelight harvesting complex photosystem II subunit 6
Annotated Gene Symbol(s)LHCB6, CP24
Annotation TypeOrtholog
Chromosome Positionchr1:5446685-5447676 | Reverse length=258
E-Value4.4E-36
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1121.53270564066
Replicate 2135.31844261942
Replicate 3170.08301054876
Condition 2: 8 Hour
Replicate 131.514187913096
Replicate 238.032142687535
Replicate 336.947469181968
Condition 3: 24 Hour
Replicate 1198.06027698139
Replicate 2168.9713063081
Replicate 3181.87896465467


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_75744.p1 GENE.S_Transcript_75744~~S_Transcript_75744.p1 ORF type:3prime_partial len:90 (+),score=11.20,Chloroa_b-bind|PF00504.17|2.2e-20 S_Transcript_75744:718-984(+)
ATGACTATTTTTTCTCTCCACCTATACGAGGAAACTCGCCCTCCCGAAGAGCGATTTTCACTGTCAAAACTCGCCATCGGGACGACGAGGTTGGCAGGAGACTATGGATTTGACCCACTAGGGCTGGGCAAGGACCCAGCATTCCTCAAGTGGTACAGAGAGGCTGAGCTGATCCACGGGCGTTGGGCCATGCTGGCTGTGGTGGGGATCTTTGTGGGCCAGGCCTGGAGTGGCATCCCATGGTATGAGGCTGGTGCAGCCCCAGGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_75744.p1 GENE.S_Transcript_75744~~S_Transcript_75744.p1 ORF type:3prime_partial len:90 (+),score=11.20,Chloroa_b-bind|PF00504.17|2.2e-20 S_Transcript_75744:718-984(+)
MTIFSLHLYEETRPPEERFSLSKLAIGTTRLAGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMLAVVGIFVGQAWSGIPWYEAGAAPG

Click here to download the sequence:
Link to NCBI Protein BLAST