Transcript Information: S_Transcript_75756.p1


Annotated TAIR IDAT2G43410.2
Annotated Gene NameRNA binding
Annotated Gene Symbol(s)FPA
Annotation TypeOrtholog
Chromosome Positionchr2:18026397-18030989 | Reverse length=901
E-Value9.6E-178
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.6227801076359
Replicate 214.185002551668
Replicate 314.879224365752
Condition 2: 8 Hour
Replicate 113.349453373663
Replicate 214.864007909784
Replicate 313.271222633158
Condition 3: 24 Hour
Replicate 117.327805887454
Replicate 214.520204704846
Replicate 313.052764223213


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_75756.p1 GENE.S_Transcript_75756~~S_Transcript_75756.p1 ORF type:3prime_partial len:885 (+),score=200.50,RRM_1|PF00076.18|2.7e-13,RRM_1|PF00076.18|1.1e-12,RRM_1|PF00076.18|2.6e-08,RRM_6|PF14259.2|3.4e-09,RRM_6|PF14259.2|1.3e-09,RRM_6|PF14259.2|3.5e-05,RRM_5|PF13893.2|0.00042,RRM_5|PF13893.2|4.9e-09,RRM_5|PF13893.2|6e-10,RRM_occluded|PF16842.1|1,RRM_occluded|PF16842.1|0.02,RRM_occluded|PF16842.1|1.1,SPOC|PF07744.9|2.1e-07,SPOC|PF07744.9|1.1e+04 S_Transcript_75756:139-2790(+)
ATGAGGCCAAAGAGACCAGGAGGCTACGGAGGTCGAGGCTCGAGCGATTCCGACACTCCGTCAAGCAATCTATGGGTCGGAAACTTACCACTCGACATAACCGAACCCGAATTGACGGAACTTTTCGAGAAACACGGTTTGATCGATGAGATCACTTGCTACGCTTCTAGAAGCTACGCTTTTGTCTACTACAAATGTGTTGAGGACGCTACTTCTGCTAAAGATTCCCTTCAAGGCTTTTTGATTAGAGGAAATCCCATTAAGATTGAGTTTGCCAAACCGGCTAAGCCCTCAAAGCATGTATGGGTTGGTGGGTTTGGCTCTTCTGTCACCAAGGAACAGCTGGAAGAAGAATTGATTAAATTTGGTAAAATTGAGGAGTTTAAGTTCATCCGAGATCGGAATACTGCACTTGTTGACTTTCTTAGGGTAGAAGATGCTTCTGCAGCAGTGAAGAACTTGAATGGTTTGCAAATTGGTGGTGATCGCATACGTGTTGACTATCTGAGATCTCATCCTGCAAGGAGGGAACAATCTGATTTCCATGAGATGGGAGGTGCACAGTTCAGAGGTATTGGTGGCATGGATCTGTCATGGACAAATCCAGACAACATGAGGAATTTCCCTGAGCCCACTTTTTCAGGACATAAGAGGTCGCAGCCATCTCAATCTATTGGAGGGCGTAAATCTGGTCAGCCAAGTAAAGTTTTGTGGGTCGGATATCCAAATTCGGTGGTAATAGATGAAGAAATGTTGCATAACGCGATGATTCTGTATGGAGAGATTGAGAGAATAAAATGTTTCCCCTCTAGACATTATGCTTTTGTGGATTTTAGAAGTGTGGAAGAAGCCAGGCGGGCTAAGGAGGCCTTGCAAGGGAGACTATTTAATGATCCACGGATTACAATTATGTTTTCCAACAGCGACTTAGCTCCAGGCAAAGATTTTAGTCCAGCATATCCTGGGTACAGGGGACAGGGACCTGATATGTTCAGAAATGAAGTTCCTTTCCGTCCGCCGATGATGGATATATTCCCTTCAAATCAGGGTATGCCCCCAAACAAATTTTCTGGGCCTCCTGCTCCAAGTGGCTTGCTCAGACCTGGACCAAGGCCATTTGGGCCTAGGGGTAGCATGGATCCGCTGCGATCGGGCCCAGAATATTCTGATTCAATGTCTGACTTGACTAATAATGCTTCTACTGGTTTGAACCGAAGAAAATTATCTCCACCTGCTACAGGATTACTTCCGACCCCTGGTGCCCCTGGTAGGACATCCCATAAAACTAGTGGATGGGATGTTCTCGATCCCAATCAGCTTCCAAGGGAATCTAAGAGGTCGAGAATAGATGGTCCATCTTTATACAACAACCCCCCTCTCATCACAGGAAAGGGGGATGAATATCCTGCTGGTGTGGATCAAGCTTATGGCACCGATCCCCAATTTACTGGTGGACCACCTCCTAAAGTTCATGCTGATAGCGGATTAGGTCCTGCAGATATGGGTGTTCCCAAAGGTTGGGCTGATGAAGATTTTATTTGGCGTGGAGTGATTGCAAAGGGTGGCACTCCTGTCTGCCGTGCTCGGTGCATCCCTATGGGAAAAGGATTAGAGTGTGAGCTGCCTGAAGTTGTCAATTGCTCTGCAAGAACAGGATTAGACATGCTAGCAAAGCACTATGCTGGTGCTATTGGGTTTGACATTGTCTTTTTCTTGCCAGATAGTGAAGATGATTTTGCCAATTATACAGAGTTTCTTCGGTATCTTGGTTCAAAAGACCGTGCTGGTGTGGCTAAGTTGGATGATGGAACGACCTTATTTTTAGTACCTCCATCAGAGTTCCTGACAGATGTTTTGAAGGTGGCTGGACCCGAGCGTTTATATGGAGTAGTGCTTAGGTTGCCACAACAACTCCCTGGTGCAGCTGCTCCTCAGCCGGTACATCAGCCCCTTCCTCCTATGCAGCACATGGAGAGCCAGTTGGCTCCTCCACCACATGAATATGTTGCTCCCACTCCCAAGAGAGAAATGGCCATTCAAATGGACTATGGAAGACCTATGCCTGCTGAGACAACCATGCCTCCTAAAGCGCCTTTTCCTGCCGCAGCTGTTCCACAAAACCAATCTAGTGATAGCAATCCATCCACATCATTACCTGCTGTCACATTGACACCTGAGCTTATTGCCACCCTTGCTTCTTTGATTCCATCAAATGCTCAGGCCCCTCTTGCACAAAGTGCTCAGCCACAATTAAGCTCCTCTGCAGCAATGCCTTCGTTTCCTGTACCATCAACTGAAAAAGGAGCTTTCTTCCAGACTCATCAGCCTCAAGTGGTTGACCAAAGTGGTCAGCTCTCTCAACAGTTTAGTGGTCAACCATCTCAACAGTTTAGTGGTCAACCATCTCAACAGTTTAATGGTCAACCATCTCAACAGTTTAGTGGTCAACCATCTCAACAGTTTAGTGGTCAACCATCTCAACAGTTTAATGGTCAACCATCTCAACAGTTTAGTGGTCAACCATCTCAACAGTTTAGTGGTCAACCATCTCAACAGTTTAGTGGTCAACCATATCCCAATACGCAAACTGGCTTTCACCATCTATATTCTTCTAATAACTTAAATGCAAACAACCATCCAGTTCCAGTTCAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_75756.p1 GENE.S_Transcript_75756~~S_Transcript_75756.p1 ORF type:3prime_partial len:885 (+),score=200.50,RRM_1|PF00076.18|2.7e-13,RRM_1|PF00076.18|1.1e-12,RRM_1|PF00076.18|2.6e-08,RRM_6|PF14259.2|3.4e-09,RRM_6|PF14259.2|1.3e-09,RRM_6|PF14259.2|3.5e-05,RRM_5|PF13893.2|0.00042,RRM_5|PF13893.2|4.9e-09,RRM_5|PF13893.2|6e-10,RRM_occluded|PF16842.1|1,RRM_occluded|PF16842.1|0.02,RRM_occluded|PF16842.1|1.1,SPOC|PF07744.9|2.1e-07,SPOC|PF07744.9|1.1e+04 S_Transcript_75756:139-2790(+)
MRPKRPGGYGGRGSSDSDTPSSNLWVGNLPLDITEPELTELFEKHGLIDEITCYASRSYAFVYYKCVEDATSAKDSLQGFLIRGNPIKIEFAKPAKPSKHVWVGGFGSSVTKEQLEEELIKFGKIEEFKFIRDRNTALVDFLRVEDASAAVKNLNGLQIGGDRIRVDYLRSHPARREQSDFHEMGGAQFRGIGGMDLSWTNPDNMRNFPEPTFSGHKRSQPSQSIGGRKSGQPSKVLWVGYPNSVVIDEEMLHNAMILYGEIERIKCFPSRHYAFVDFRSVEEARRAKEALQGRLFNDPRITIMFSNSDLAPGKDFSPAYPGYRGQGPDMFRNEVPFRPPMMDIFPSNQGMPPNKFSGPPAPSGLLRPGPRPFGPRGSMDPLRSGPEYSDSMSDLTNNASTGLNRRKLSPPATGLLPTPGAPGRTSHKTSGWDVLDPNQLPRESKRSRIDGPSLYNNPPLITGKGDEYPAGVDQAYGTDPQFTGGPPPKVHADSGLGPADMGVPKGWADEDFIWRGVIAKGGTPVCRARCIPMGKGLECELPEVVNCSARTGLDMLAKHYAGAIGFDIVFFLPDSEDDFANYTEFLRYLGSKDRAGVAKLDDGTTLFLVPPSEFLTDVLKVAGPERLYGVVLRLPQQLPGAAAPQPVHQPLPPMQHMESQLAPPPHEYVAPTPKREMAIQMDYGRPMPAETTMPPKAPFPAAAVPQNQSSDSNPSTSLPAVTLTPELIATLASLIPSNAQAPLAQSAQPQLSSSAAMPSFPVPSTEKGAFFQTHQPQVVDQSGQLSQQFSGQPSQQFSGQPSQQFNGQPSQQFSGQPSQQFSGQPSQQFNGQPSQQFSGQPSQQFSGQPSQQFSGQPYPNTQTGFHHLYSSNNLNANNHPVPVH

Click here to download the sequence:
Link to NCBI Protein BLAST