Transcript Information: S_Transcript_75801.p1


Annotated TAIR IDAT2G05100.1
Annotated Gene Namephotosystem II light harvesting complex gene 2.1
Annotated Gene Symbol(s)LHCB2.1, LHCB2
Annotation TypeOrtholog
Chromosome Positionchr2:1823449-1824331 | Reverse length=265
E-Value7.5E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5524250720522
Replicate 24.0448447522111
Replicate 31.5368946736334
Condition 2: 8 Hour
Replicate 10.88855792988054
Replicate 20.18643207199772
Replicate 30.71052825349938
Condition 3: 24 Hour
Replicate 10
Replicate 25.2882227011477
Replicate 31.2611022202558


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_75801.p1 GENE.S_Transcript_75801~~S_Transcript_75801.p1 ORF type:internal len:120 (+),score=-19.30,Chloroa_b-bind|PF00504.17|3.2e-21 S_Transcript_75801:2-358(+)
GCGTTGGCTAGACCTCTACGTTCTTCGCAAATTCAAAAGAAAAGACAAGTCAAGATGCCCGCCATGGCCTTCAACACCACCTCGGCGCGCACCGTCGCCCCAGTCACCGGCAAGCGTGGCGTCGCCGCGCGCGCCGCCGTCGAGTGGTACGGCCCCGACCGTGCCAAGTGGCTCGGCCCGCTGTCCGAGAACGCGGTGCCAAGCTACCTCAACGGTGAGTTCCCTGGTGACTACGGCTGGGACACCGCCGGCCTCGCGGCGGACCCAGAGACGTTCAAGCGCTACCGCGAGCTCGAGCTCATCCACGCCCGGTGGGCCATGCTCGGCGCCCTCGGCTGCGTCACGCCCGAGATCCTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_75801.p1 GENE.S_Transcript_75801~~S_Transcript_75801.p1 ORF type:internal len:120 (+),score=-19.30,Chloroa_b-bind|PF00504.17|3.2e-21 S_Transcript_75801:2-358(+)
ALARPLRSSQIQKKRQVKMPAMAFNTTSARTVAPVTGKRGVAARAAVEWYGPDRAKWLGPLSENAVPSYLNGEFPGDYGWDTAGLAADPETFKRYRELELIHARWAMLGALGCVTPEIL

Click here to download the sequence:
Link to NCBI Protein BLAST