Transcript Information: S_Transcript_75870.p2


Annotated TAIR IDAT4G29520.1
Annotated Gene NameLOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Saposin B (InterPro:IPR008139); Has 137 Blast hits to 137 proteins in 50 species: Archae - 2; Bacteria - 0; Metazoa - 41; Fungi - 10; Plants - 36; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:14494056-14495657 | Reverse length=306
E-Value2.9E-57
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3915294763493
Replicate 23.4608297345121
Replicate 32.2902744156105
Condition 2: 8 Hour
Replicate 11.9513429048357
Replicate 20
Replicate 32.3684275116646
Condition 3: 24 Hour
Replicate 11.2849931465055
Replicate 20.74064743713554
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_75870.p2 GENE.S_Transcript_75870~~S_Transcript_75870.p2 ORF type:complete len:153 (+),score=31.67 S_Transcript_75870:233-691(+)
ATGGCAAACAAGGAAAAATCATGGCTTTTAGTGGCAAATATAGCATTACTAATACTAGTTCTCTTATCTTTGGCACCAATATCAAATTGCTCAAATAACCCATCATCACCTGCTAGAAAAGAAGACATACCTTACATAAAGTGTCAAGTTTGTGAGAAACTTGCTTCTCAATTGCACTCTCTAGTCCACAATAAGGAAGCTCTGATCTCTCCTAAGAAGATCTCAGAGTACCAGATTATAGAGATTGTTGAGAATGTTTGCAATTTGAAGAAGGAAGAAGCTGATTGGATTTTGAAGATTGATATTGTTGAACAAGGAGATAAGTTGGAGCTGGTTGATCAAGATGCTGAAGGGCAATGCAACTCTGAGTGCAAGACGATAGAACGTGCATGTCAGGAGGTTAATCAAAAAATCAAATTGAAGTTCCTGAGTATTTTAAATTGTGCTTGTAGACCCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_75870.p2 GENE.S_Transcript_75870~~S_Transcript_75870.p2 ORF type:complete len:153 (+),score=31.67 S_Transcript_75870:233-691(+)
MANKEKSWLLVANIALLILVLLSLAPISNCSNNPSSPARKEDIPYIKCQVCEKLASQLHSLVHNKEALISPKKISEYQIIEIVENVCNLKKEEADWILKIDIVEQGDKLELVDQDAEGQCNSECKTIERACQEVNQKIKLKFLSILNCACRP*

Click here to download the sequence:
Link to NCBI Protein BLAST