Transcript Information: S_Transcript_75871.p1


Annotated TAIR IDAT4G29520.1
Annotated Gene NameLOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Saposin B (InterPro:IPR008139); Has 137 Blast hits to 137 proteins in 50 species: Archae - 2; Bacteria - 0; Metazoa - 41; Fungi - 10; Plants - 36; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:14494056-14495657 | Reverse length=306
E-Value3.9E-134
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.431917077332
Replicate 219.714170023973
Replicate 316.063028201846
Condition 2: 8 Hour
Replicate 122.976388277169
Replicate 219.773827507371
Replicate 322.484781183319
Condition 3: 24 Hour
Replicate 113.45926692485
Replicate 217.180631356263
Replicate 315.214588076635


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_75871.p1 GENE.S_Transcript_75871~~S_Transcript_75871.p1 ORF type:complete len:310 (+),score=85.53 S_Transcript_75871:233-1162(+)
ATGGCAAACAAGGAAAAATCATGGCTTTTAGTGGCAAATATAGCATTACTAATACTAGTTCTCTTATCTTTGGCACCAATATCAAATTGCTCAAATAACCCATCATCACCTGCTAGAAAAGAAGACATACCTTACATAAAGTGTCAAGTTTGTGAGAAACTTGCTTCTCAATTGCACTCTCTAGTCCACAATAAGGAAGCTCTGATCTCTCCTAAGAAGATCTCAGAGTACCAGATTATAGAGATTGTTGAGAATGTTTGCAATTTGAAGAAGGAAGAAGCTGATTGGATTTTGAAGATTGATATTGTTGAACAAGGAGATAAGTTGGAGCTGGTTGATCAAGATGCTGAAGGGCAATGCAACTCTGAGTGCAAGACGATAGAACGTGCATGTCAGGAGGTTCTTGGGTATTCTGACACTGATGTTGCTGAATACATATATTCTCGGAAACCTCAGCTCGATGCTTTAGTAAATTATCTATGTAAGGACCTCAGTAAAGCATGCAGTAAGAAGCCGCCTCCAGTGCCAAAGGACAGGGTTCCAGGAGAAGCATTTGTTCCAAAGCCAACCAAAGAAGCTGAAATGGAAAAGATAATGCGATCCATGGAGGGTCTCCCAGGAGCACCTGGAATGAAGATGTACTCTAGGGAAGAATTGATGAACATGCAAAATTTAGGCGATGAGGATGCTGATGAAGACGATGATGAGGAGGAGGTCAAATTCCGATCAAATTTGGGAAAAGCTTTCAAGGAGAAGGCAAATAAGAAGGTTGATTGGAAAGATGAAGTCAAGAAGCACATAACAAATGCAGGGAAGACAGTAAAGAAACATGTAAATAGAGTCTCTTACCGGCTACAAAGATGGTGGAAATCAAAGAGAAATGCAAGTGTTAAAAAGAAGAAATCAACGGCCAAGAAGGCAGAACTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_75871.p1 GENE.S_Transcript_75871~~S_Transcript_75871.p1 ORF type:complete len:310 (+),score=85.53 S_Transcript_75871:233-1162(+)
MANKEKSWLLVANIALLILVLLSLAPISNCSNNPSSPARKEDIPYIKCQVCEKLASQLHSLVHNKEALISPKKISEYQIIEIVENVCNLKKEEADWILKIDIVEQGDKLELVDQDAEGQCNSECKTIERACQEVLGYSDTDVAEYIYSRKPQLDALVNYLCKDLSKACSKKPPPVPKDRVPGEAFVPKPTKEAEMEKIMRSMEGLPGAPGMKMYSREELMNMQNLGDEDADEDDDEEEVKFRSNLGKAFKEKANKKVDWKDEVKKHITNAGKTVKKHVNRVSYRLQRWWKSKRNASVKKKKSTAKKAEL*

Click here to download the sequence:
Link to NCBI Protein BLAST