Transcript Information: S_Transcript_75989.p1


Annotated TAIR IDAT5G08110.1
Annotated Gene Namenucleic acid binding;ATP-dependent helicases;ATP binding;helicases;ATP-dependent helicases
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2594854-2600114 | Reverse length=1141
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.1154543902685
Replicate 22.8010466544578
Replicate 33.284114587022
Condition 2: 8 Hour
Replicate 13.7095279117189
Replicate 24.5924075113701
Replicate 33.6727222996217
Condition 3: 24 Hour
Replicate 13.2776329722079
Replicate 23.0828762655378
Replicate 32.2664491674836


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_75989.p1 GENE.S_Transcript_75989~~S_Transcript_75989.p1 ORF type:complete len:1213 (+),score=237.94,DEAD|PF00270.25|2.4e-24,DUF1998|PF09369.6|1.6e+04,DUF1998|PF09369.6|2.1e-22,Helicase_C|PF00271.27|1.2e+03,Helicase_C|PF00271.27|1.8e-11 S_Transcript_75989:132-3770(+)
ATGGAGGAGAGAGAGATGGAAGTGCGAAGCTTAAGCGGTGAATCGATTACCGTATCGATTTCGACGAGCAAATCCATTCGAGACCTGAAGATTCTACTAAAGCAACGATTTCCTCCTGCTTCTTCTTCTACTTGTTCCGATTTTCACCTTTTCCTTCGAGGCATGAAACTAGGTGTACAAAGCCAAATAGGTAGTCTCTCCATCAATCAAGGAGAATTTATCGCTCTTATGCCATTTACAAAAAAGGGAAAATCTCAACATACTCAGGGATCTGAGGCTCCTTCACAAATATGTCATCAAAGTGTGCCTTCGAACCTAGCTGAATCGACATGGCGTGAAATGATGGAAGATCTTGCTCATCTGAACAAAACATCAGATTTCAATGAACAACCTGATCTTTTGCCAAGTTGTACTAGTCATACCATGAGTGAGAATAGTACTATGGGTTATTTGTCAAGAAAGCGTAAAAGGATGTCCAAAACTGATAGCAAGGAACAGCTATCTGAGGAGGTTTTATCTAATATACTGCAGACCTCTGGAAAGCATATTCTGAATGAGGATTTTTGCAAAACTCTTCTAAATCTCTTGGAGTCTGTGCATTGTCTATCGGATGTGAAAACTGGGAAGTGTGTGCTGTTGAGCGAGGCCAACATTTCAGCAAGTGGTCAGCCCTCGTCTTCATGCATTTGTCCAACTTGGCTAAAGACAGTGCTGAAGGCATTTACATTCTTGAACATTCTTTGTGGACTCTTGCAAATGCAGCAGGAAACAGTCACATTTAATCGTGTAAAGGATTCACTTGATAAACTTCGGGCGTATGGATTTTCTGCTAGAATTGAGGATCTGAAGCAACTGTCAGTTCTTTGCCCTAAGGTGGTGCATATAGTTGAGCGAGAAGAAGATATTAGAATGTCGCATAATGTCATTGTGATTTTCCACATCTCAAGCAAAAAGAGAGATGAGACTAGAGCTCGAAAGGTATCAATGTCAAAGATTATCAGTTCAATTAAGACAAGACAGGCACTCGTTATTGCAACTTTACAGAAGGCCCTCAGTTTGTTTATGCTGGAAGGAAGACATGGTTACAAAAATGTTGTTTCTTTGGATGATTTAATTATGTATATGAAGAAAGTTGATCCCCCAGCCCAAAGAATTGAAGCAGCAGAGGATAGGTCTTCATCAGAGAAATCAAAGTCCTGCTCTGTTGAAACACAATGTCATGAGACACATCCACTCTCACCTTCATCAATGCTTGAACATCTTCGAAAGGGATTTGGATCTAAAGGACAGATGGTACATGTAGAAGAAATTAGTGCAAGAATGGCAGACCTTACGGAAGTCCCAGAGGATTTTTCAGAATATGTGAAGTCTGCTCTGAACTCTCTTGGAATTACTAAGTTGTACAGTCATCAGGCTGAGTCCGTAAAGGCTTCCTTATCTGGCAGAAATGTTGTTGTCGCGACCATGACATCTAGTGGGAAATCTCTTTGCTACAATCTACCAGTTCTAGAAGCATTATCTCAGAATCAACTATCATGTGCTCTATACTTGTTCCCAACAAAGGCCTTAGCTCAGGATCAATTACGAGCTTTGCTGGCTATGACTGAAAATTTTGAACCCTTAAGCATAGGTGTGTATGATGGTGACACGTCTTTGGCAGAGAGGAATTGGCTCCGTGATACTGCCAGACTGTTGATCACAAATCCAGATATGCTTCACATGTCAATCTTGCCATATCATGGACAGTTTCAGCGCATTCTATCAAATCTCAAGTTTGTGGTCATTGATGAAGCTCATGCTTATAAGGGAGCATTTGGATGTCATACTGCCCTTATACTGAGGAGACTACGCCGCTTATGTTCTCATGTGTATGGGTCTGATCCTTCTTTTGTATTTTCAACTGCAACTTCTGCCAATCCCCGAGAGCATGTAATGGAACTTGCAAATTTACCAACAGTTGAGCTAATTGACAAAGATGGAAGTCCTTCAGGTTCAAAGTTCTTCATTATGTGGAATCCACCTTTGTGTTCAGTAACTGTCCCGCAGACTGGGAAAAAGGACAAAAATGCCATCACAAGACGATCAAGCCCTATAATGGAAGTTTCACGTCTCCTAGCTGAAATGGTGCAGCATGGACTTCGCAGCATTGCTTTCTGCAAAAGTCGCAAACTTTGTGAACTTGTCTTATCTTACACACGGGAGATTCTTCAGGATACAGCACCTCATCTTGTTGACTCCATATGTGCTTACCGTGCTGGCTACATTGCTGAGGATAGGAGGAGAATAGAGAATGAATTTTTTAGTGGGAAGCTATGTGGAATTGCTGCTACAAATGCTCTTGAGTTGGGTATTGATGTTGGACACATTGATGTGACTCTGCATCTAGGGTTCCCGGGCAGCATTGCTAGCCTCTGGCAGCAGGCTGGTAGATCTGGAAGGAGGGGTAGACCATCACTTGCTGTGTATGTTGCTTTTGAAGGACCTCTGGATCAATATTTTATGAAATTTCCACAGAAGCTATTCGGGCGCAATGTAGAGTGCTGTCATGTAGATGCTCGAAACCCAAAGGTTCTTGAGCAACACCTCATCTGTGCTGCTGTAGAGCATCCCCTGAGTTTGATATATGATGGCAAGTATTTTGGTTCTGGTTTAGATAGTGCCATTTTGGCACTTCAAATGAGGGGGTACCTATCTTATGATCCCTCCTGTGATTCTGTGGATAAAATATGGACTTACATAGGTCATGAGAAATCACCATCACGGGTAATTAGCATTCGTGCAATTGAATCTGAGAAGTACCAAGTAGTTGATAAACAAACTAACGAAGTTATTGAAGAGATTGAAGAAAGCAGGGCTTTCTTCCAGGTATATGAAGGCGCAGTCTACATGAATCAGGGAAAGACTTATCTAGTGAAAGAGTTGGATTTATCAAGTAAGACTGCCATTTGTCAAAAAGCAGATTTGAAGTACTATACGAAGACTCGTGACTACACCGACATTGATGTTGGCCGTCTTGCTTATCCAACCAGAGGCTCCAAGACCCAAGTTTGCAGAACCACAGCCCAATCAAGATCCTGCAGAGTAACCACTACTTGGTTTGGCTTTCGCCGTATATGTAAGAGAAGCCATAGAGTAATCGATACAGTTGAACTTGTACTTCCTAAATATTCATATGAATCAGAGGCAGTCTGGATTGAAGTTCCTCCATCTGTTAAAACAGCAGTAGAGAGAGAGAATTTATCGTTTCGTGGAGGCTTGCATGCTGCTTCCCATGCAGTCCTCAATGTCGTGCCTTTATACATAATGTGTGAGTCCTCGGATTTGGCTCCAGAGTGTGCAAATCCTCATGAGGCCCGCTACGTACCCGAGAGGATCTTAGTCTATGATCAGCGTCCTGGAGGGACAGGTCTGTCAAAGCAGATTCAACCACTTTTAAATGACCTTTTAGCTGCTGCTTTGGATATGCTCACATCATGCCACTGCTCTTCAGAAACAGGATGCCCCAATTGTGCCCATAGTCTAGCATGTCAGGAGTACAATGAACTTCTGCATAAGGAAGCTGCAATCATGATTATCAAGGGTGTTTTAGATGCAGAAGAGTCGTACTTCCGTGAAGTGCCTGGACCTTCAGAAATCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_75989.p1 GENE.S_Transcript_75989~~S_Transcript_75989.p1 ORF type:complete len:1213 (+),score=237.94,DEAD|PF00270.25|2.4e-24,DUF1998|PF09369.6|1.6e+04,DUF1998|PF09369.6|2.1e-22,Helicase_C|PF00271.27|1.2e+03,Helicase_C|PF00271.27|1.8e-11 S_Transcript_75989:132-3770(+)
MEEREMEVRSLSGESITVSISTSKSIRDLKILLKQRFPPASSSTCSDFHLFLRGMKLGVQSQIGSLSINQGEFIALMPFTKKGKSQHTQGSEAPSQICHQSVPSNLAESTWREMMEDLAHLNKTSDFNEQPDLLPSCTSHTMSENSTMGYLSRKRKRMSKTDSKEQLSEEVLSNILQTSGKHILNEDFCKTLLNLLESVHCLSDVKTGKCVLLSEANISASGQPSSSCICPTWLKTVLKAFTFLNILCGLLQMQQETVTFNRVKDSLDKLRAYGFSARIEDLKQLSVLCPKVVHIVEREEDIRMSHNVIVIFHISSKKRDETRARKVSMSKIISSIKTRQALVIATLQKALSLFMLEGRHGYKNVVSLDDLIMYMKKVDPPAQRIEAAEDRSSSEKSKSCSVETQCHETHPLSPSSMLEHLRKGFGSKGQMVHVEEISARMADLTEVPEDFSEYVKSALNSLGITKLYSHQAESVKASLSGRNVVVATMTSSGKSLCYNLPVLEALSQNQLSCALYLFPTKALAQDQLRALLAMTENFEPLSIGVYDGDTSLAERNWLRDTARLLITNPDMLHMSILPYHGQFQRILSNLKFVVIDEAHAYKGAFGCHTALILRRLRRLCSHVYGSDPSFVFSTATSANPREHVMELANLPTVELIDKDGSPSGSKFFIMWNPPLCSVTVPQTGKKDKNAITRRSSPIMEVSRLLAEMVQHGLRSIAFCKSRKLCELVLSYTREILQDTAPHLVDSICAYRAGYIAEDRRRIENEFFSGKLCGIAATNALELGIDVGHIDVTLHLGFPGSIASLWQQAGRSGRRGRPSLAVYVAFEGPLDQYFMKFPQKLFGRNVECCHVDARNPKVLEQHLICAAVEHPLSLIYDGKYFGSGLDSAILALQMRGYLSYDPSCDSVDKIWTYIGHEKSPSRVISIRAIESEKYQVVDKQTNEVIEEIEESRAFFQVYEGAVYMNQGKTYLVKELDLSSKTAICQKADLKYYTKTRDYTDIDVGRLAYPTRGSKTQVCRTTAQSRSCRVTTTWFGFRRICKRSHRVIDTVELVLPKYSYESEAVWIEVPPSVKTAVERENLSFRGGLHAASHAVLNVVPLYIMCESSDLAPECANPHEARYVPERILVYDQRPGGTGLSKQIQPLLNDLLAAALDMLTSCHCSSETGCPNCAHSLACQEYNELLHKEAAIMIIKGVLDAEESYFREVPGPSEI*

Click here to download the sequence:
Link to NCBI Protein BLAST