Transcript Information: S_Transcript_76242.p1


Annotated TAIR IDAT5G46860.1
Annotated Gene NameSyntaxin/t-SNARE family protein
Annotated Gene Symbol(s)VAM3, ATVAM3, SYP22, ATSYP22, SGR3
Annotation TypeOrtholog
Chromosome Positionchr5:19012342-19013795 | Reverse length=268
E-Value1.6E-122
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 141.95918442919
Replicate 237.683888733273
Replicate 338.097038771233
Condition 2: 8 Hour
Replicate 141.716821934246
Replicate 242.702470213785
Replicate 337.886196290605
Condition 3: 24 Hour
Replicate 146.799075215251
Replicate 236.063583384261
Replicate 337.741015350721


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_76242.p1 GENE.S_Transcript_76242~~S_Transcript_76242.p1 ORF type:complete len:274 (+),score=58.08,Syntaxin_2|PF14523.2|3.2e-32,Syntaxin_2|PF14523.2|56,SNARE|PF05739.15|7.1e-14,Syntaxin|PF00804.21|6.6e-09 S_Transcript_76242:235-1056(+)
ATGAGTTTTGCAGATTTGGAAGTAGGTAGGCCTTTGCCTACAAGGAAGCAACAACAGCAAAAGGACAAAGACCCCTCAAACGCAGTGGCCGCCGGAATATTCCAGATAAATACGGCTGTCTCCACCTTTCAACGCCTTGTTAACACCCTTGGCACCCCTAAGGATACCCTTGACCTTCGTGATCGACTTCGTAAGACAAGGGTACATATTAGTCAGCTGGTTAAAGAAACCGCTGCAAAGCTCAAGGAAGCCAGTGAAACAGATCTGCATTTTGAAGTCAGTGCTAGCAAGAAGATTGCTGATGCTAAACTTGCAAAAGATTTCCAGGCAGTTCTTAAGGAATTCCAAAAGGCACAGAGACTTGCAGCTCAAAGAGAAACTGCTTATTCTCCCTTTGTTCCAAAGGAAGTGCCTTCATCTCGGTCCAAGATAGATGTTGAGGAGGTAGACTCATTTCAGAGGCAGGAGCAGCAGGCCCAGCTATTGCACTCCAGAAGAGAGGAGGTAGTACTTCTAGACAATGAGCTTCTTTTTAATGAAGCCGTTATCGAAGAAAGAGAGCAAGGAATTCAGGAAATCCAACAACAGATTGGTGAAGTGAATGAGATCTTTAAAGACCTCGCGGTGCTAGTCCAGGATCAGGGTGTCTTGATAGATGACATTAGTTCACACATTGAGAATTCCCATGCTGCAACTTCACAAGGAACTGCGCATCTTGTTAAAGCTGCCAGGGCCCAAAGATCCAGTTCATCTCTGGTATGTCTGCTTTTAGTGATTTTTGGGATCATCCTACTCATTGTGATCATAGTGGTCGTTTTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_76242.p1 GENE.S_Transcript_76242~~S_Transcript_76242.p1 ORF type:complete len:274 (+),score=58.08,Syntaxin_2|PF14523.2|3.2e-32,Syntaxin_2|PF14523.2|56,SNARE|PF05739.15|7.1e-14,Syntaxin|PF00804.21|6.6e-09 S_Transcript_76242:235-1056(+)
MSFADLEVGRPLPTRKQQQQKDKDPSNAVAAGIFQINTAVSTFQRLVNTLGTPKDTLDLRDRLRKTRVHISQLVKETAAKLKEASETDLHFEVSASKKIADAKLAKDFQAVLKEFQKAQRLAAQRETAYSPFVPKEVPSSRSKIDVEEVDSFQRQEQQAQLLHSRREEVVLLDNELLFNEAVIEEREQGIQEIQQQIGEVNEIFKDLAVLVQDQGVLIDDISSHIENSHAATSQGTAHLVKAARAQRSSSSLVCLLLVIFGIILLIVIIVVVF*

Click here to download the sequence:
Link to NCBI Protein BLAST