Transcript Information: S_Transcript_76312.p1


Annotated TAIR IDAT4G16444.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CHD5-like protein (InterPro:IPR007514); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:9274791-9276056 | Reverse length=178
E-Value3E-56
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.225880938737
Replicate 221.3063510584
Replicate 321.920509173651
Condition 2: 8 Hour
Replicate 125.468609007319
Replicate 230.042196744776
Replicate 326.675260717091
Condition 3: 24 Hour
Replicate 122.718678830218
Replicate 219.814646692464
Replicate 317.583368099567


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_76312.p1 GENE.S_Transcript_76312~~S_Transcript_76312.p1 ORF type:complete len:175 (+),score=36.92,CHD5|PF04420.10|1.4e-11 S_Transcript_76312:90-614(+)
ATGGAAGAGGGTGGAAGCAGTTTAGCAGCTCCCGCGATATTCATCCTTGTTGCCCTAATTCAATTCGTTCCCAGATATCTCGACCACCAGATTAAGACCGGAGGAGCTGCTAGTGAGGAGGAAAAGAAGTTGCGTGCCGAAATAAAGCAGCTTCTGAAAGAAGCCAGCTCACTGACACAGCCATCAACATTTGCGCAAGCAGCAAAGCTTAGGAGGACAGCGGCAGCTAAGGAAAAAGAGCTTGCAAAATATCAGGAACAACAAATGCTGGAGAGGAGATCATCATATTATCCATATATGAAGTATGTTACTCCTGTAAAGGCATTAAGCTATCTTTTGCTAGCAGTTTGGTTTTGGAAGTATCCTGTGGCAGCAATATCTAAGGAGCTTGTGCAACCCTTTGGGAGGGTGTTGTCTTGGAGATCTGGTGCTACTTCAAAGGACAAAGTGATGGTTGGGATCATACCCTGGCTGATATTATGTACAAGGGTGAGCAAACTTATCTGCCGTAAATACCTTGGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_76312.p1 GENE.S_Transcript_76312~~S_Transcript_76312.p1 ORF type:complete len:175 (+),score=36.92,CHD5|PF04420.10|1.4e-11 S_Transcript_76312:90-614(+)
MEEGGSSLAAPAIFILVALIQFVPRYLDHQIKTGGAASEEEKKLRAEIKQLLKEASSLTQPSTFAQAAKLRRTAAAKEKELAKYQEQQMLERRSSYYPYMKYVTPVKALSYLLLAVWFWKYPVAAISKELVQPFGRVLSWRSGATSKDKVMVGIIPWLILCTRVSKLICRKYLG*

Click here to download the sequence:
Link to NCBI Protein BLAST