Transcript Information: S_Transcript_7633.p1


Annotated TAIR IDAT5G13710.1
Annotated Gene Namesterol methyltransferase 1
Annotated Gene Symbol(s)SMT1, CPH
Annotation TypeOrtholog
Chromosome Positionchr5:4424048-4426866 | Reverse length=336
E-Value3E-129
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 139.451433991851
Replicate 234.258301373227
Replicate 337.070826298695
Condition 2: 8 Hour
Replicate 124.004459452451
Replicate 229.117129636629
Replicate 331.598869565173
Condition 3: 24 Hour
Replicate 122.723069761573
Replicate 225.169358584788
Replicate 331.685985433563


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_7633.p1 GENE.S_Transcript_7633~~S_Transcript_7633.p1 ORF type:3prime_partial len:199 (+),score=32.39,Methyltransf_11|PF08241.8|2.5e+03,Methyltransf_11|PF08241.8|2.1e-20,Methyltransf_31|PF13847.2|1.4e-14,Methyltransf_25|PF13649.2|2.5e+03,Methyltransf_25|PF13649.2|9.2e-13,Methyltransf_23|PF13489.2|3.4e+03,Methyltransf_23|PF13489.2|8e-10,Ubie_methyltran|PF01209.14|8.1e-09,CMAS|PF02353.16|7.8e-09,Methyltransf_12|PF08242.8|8.2e+02,Methyltransf_12|PF08242.8|7.6e-08,Methyltransf_18|PF12847.3|1.4e-07 S_Transcript_7633:235-828(+)
ATGTCAAAGACTGGAGCAATGGATCTGGCCTCCGGCGTGGGCGGAAAGATCGACAAAGATAATGTCTATTCTGCCGTTGAGAAGTACGAGAAGTATCATGTGTACTATGGAGGTGAAGAGGAAGAAAGGAAATCTAACTACACTGACATGGTCAACAAGTATTATGATCTGGTTACAAGTTTCTATGAATTTGGATGGGGAGAGTCCTTCCATTTTGCCCACAGATGGAACGGAGAATCTCTTCGTGAGAGCATCAAACGTCATGAGCACTTTCTTGCTTTGCAACTTGGACTAAAACCTGGACAGAAGGTGTTGGACGTGGGATGTGGCATAGGCGGACCGCTCAGGGAAATATCGAGATTTAGCTCAACATCTGTGACAGGATTGAACAATAATGAATATCAAATTACAAGGGGAAAGGAACTGAACCGGATTGCAGGGGTGGACAAGACATGCAGTTTCGTCAAGGCTGATTTCATGCACATGCCATTTCCTGACAATTCTTTCGATGCAGTCTATGCAATTGAGGCAACATGTCACGCCCCTGATGCAGTTGGGTGCTACAAAGAGATACACAGGGTATTGAAGCCTGGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_7633.p1 GENE.S_Transcript_7633~~S_Transcript_7633.p1 ORF type:3prime_partial len:199 (+),score=32.39,Methyltransf_11|PF08241.8|2.5e+03,Methyltransf_11|PF08241.8|2.1e-20,Methyltransf_31|PF13847.2|1.4e-14,Methyltransf_25|PF13649.2|2.5e+03,Methyltransf_25|PF13649.2|9.2e-13,Methyltransf_23|PF13489.2|3.4e+03,Methyltransf_23|PF13489.2|8e-10,Ubie_methyltran|PF01209.14|8.1e-09,CMAS|PF02353.16|7.8e-09,Methyltransf_12|PF08242.8|8.2e+02,Methyltransf_12|PF08242.8|7.6e-08,Methyltransf_18|PF12847.3|1.4e-07 S_Transcript_7633:235-828(+)
MSKTGAMDLASGVGGKIDKDNVYSAVEKYEKYHVYYGGEEEERKSNYTDMVNKYYDLVTSFYEFGWGESFHFAHRWNGESLRESIKRHEHFLALQLGLKPGQKVLDVGCGIGGPLREISRFSSTSVTGLNNNEYQITRGKELNRIAGVDKTCSFVKADFMHMPFPDNSFDAVYAIEATCHAPDAVGCYKEIHRVLKPG

Click here to download the sequence:
Link to NCBI Protein BLAST