Transcript Information: S_Transcript_76608.p1


Annotated TAIR IDAT1G49230.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:18209320-18209979 | Forward length=219
E-Value1.3E-78
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.385690843148
Replicate 213.219440024131
Replicate 316.232656139698
Condition 2: 8 Hour
Replicate 122.999697821371
Replicate 221.909620362046
Replicate 316.647500815461
Condition 3: 24 Hour
Replicate 19.9294924957246
Replicate 29.1779071672812
Replicate 38.5463125670228


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_76608.p1 GENE.S_Transcript_76608~~S_Transcript_76608.p1 ORF type:5prime_partial len:242 (-),score=28.18,zf-RING_2|PF13639.2|3.6e-16,zf-RING_11|PF17123.1|1.5e-11,zf-RING_11|PF17123.1|1.6e+04,zf-rbx1|PF12678.3|7e+03,zf-rbx1|PF12678.3|4.3e-09,zf-C3HC4_2|PF13923.2|9.5e+03,zf-C3HC4_2|PF13923.2|3.1e-08,zf-C3HC4|PF00097.21|9.4e-07,zf-C3HC4|PF00097.21|4.6e+02 S_Transcript_76608:39-764(-)
AACCAACAAACTAAGAAAGATAACATGTCCACCTCCACTCTCTCTCCTCTACGCTACAAAGAGCTCATGAACCTTGAATACCTTCACTACTCAAGAAGGTTGCTACTTGATGGAATTCTTCACCAAACACCACCAGCAGCAGCTGCACCGTCGAAAGCGACAATCACCCCTGTGGATCCTACAGAACCTTACAGTGGTAGCAATGGCTTTGACGCCAATGTGGTAATGGTCCTATCAGTCCTCTTATGTGCCTTGATATGTTCACTAGGACTAAATTCCATAATCAAGTGTGCCCTAAGATGCTCAAATTTAGTGTCAACAACAGAGTCCAACAGCACGGATCCAGCAGCCCGATTAGCAAACAGAGGCATCAAGAAAAAAGCGCTCAAGACTTTTGCAATTGTTAATTACTCACCACACCAGAAGCTACCAGGTCTTGATAGTGAATGTGTTATATGCTTGTCAGATTTTGCTGCTGGAGAAAAAGTGAGGATCCTGCCCAAGTGTAACCATGGATTCCATGTCCGATGTATTGATAAGTGGCTGAAAACTCACTCCTCATGCCCCACCTGTAGGCACTGCTTGATTGAGACGTGCCAGAAGATAGTTGGCTGCAATCAACCTAGCTCATCACAGCCACAGCCACAGCAGCCCCAGACAACAATCATAAACATAGCACCATTAGAACGTGAAGATCTAGCACGAAATTACAGGGGGAACAGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_76608.p1 GENE.S_Transcript_76608~~S_Transcript_76608.p1 ORF type:5prime_partial len:242 (-),score=28.18,zf-RING_2|PF13639.2|3.6e-16,zf-RING_11|PF17123.1|1.5e-11,zf-RING_11|PF17123.1|1.6e+04,zf-rbx1|PF12678.3|7e+03,zf-rbx1|PF12678.3|4.3e-09,zf-C3HC4_2|PF13923.2|9.5e+03,zf-C3HC4_2|PF13923.2|3.1e-08,zf-C3HC4|PF00097.21|9.4e-07,zf-C3HC4|PF00097.21|4.6e+02 S_Transcript_76608:39-764(-)
NQQTKKDNMSTSTLSPLRYKELMNLEYLHYSRRLLLDGILHQTPPAAAAPSKATITPVDPTEPYSGSNGFDANVVMVLSVLLCALICSLGLNSIIKCALRCSNLVSTTESNSTDPAARLANRGIKKKALKTFAIVNYSPHQKLPGLDSECVICLSDFAAGEKVRILPKCNHGFHVRCIDKWLKTHSSCPTCRHCLIETCQKIVGCNQPSSSQPQPQQPQTTIINIAPLEREDLARNYRGNS*

Click here to download the sequence:
Link to NCBI Protein BLAST