Transcript Information: S_Transcript_76672.p1


Annotated TAIR IDAT4G36860.1
Annotated Gene NameLIM domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:17358580-17361189 | Reverse length=553
E-Value1.6E-219
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.7137454508409
Replicate 29.2112146402624
Replicate 39.3135817222183
Condition 2: 8 Hour
Replicate 112.368726383937
Replicate 211.577431671059
Replicate 311.244109611628
Condition 3: 24 Hour
Replicate 18.5741167700582
Replicate 210.595331911942
Replicate 36.620786656343


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_76672.p1 GENE.S_Transcript_76672~~S_Transcript_76672.p1 ORF type:5prime_partial len:400 (+),score=67.73,DUF3633|PF12315.4|5.9e-94,LIM|PF00412.18|1.4e-07,LIM|PF00412.18|2.1e+02,LIM|PF00412.18|1.5e+03 S_Transcript_76672:3-1202(+)
AGAGCTCTTCAAGAAAGTTTGACAGTTGAGTCTCCTCCACGATATGGGCATGGAAATGGGAGCATGGCTCAACCTATTACAGTTCCCTATCCAACAGGGTTTAGGATCTGCGCTGGATGCCATTCTGAGATTGGTTATGGACGTTTTTTAAGTTGCATGGGTGGACTTTGGCATCCTGAATGCTTTAGATGCCATGCTTGCAATTTACCCATTTCAGGTTATGAGTTCTCTATGTGTGGAGGTTATCCTTACCACAAAAATTGCTACAAAGAGCAGTACCATCCAAAATGTGGAGTGTGTAAGCAGTTTATTCCAACAAATGCTGCTGGTCTTATTGAGTACAGGGCACATCCTTTCTGGGACCAGAAGTACTGTCCTGTTCATGAGCTTGATGGAACTCCAAGGTGCTGTAGTTGTGAACGGATGGAGCCACAGGACACAGGATATGTTTGTCTTGACGATGGTCGGAAATTATGCTTGGAGTGTTTGGATTCTGCTGTCATGGATACGAATCAATGTCAGCCGCTTTATCTTGACATTCAAGAATTTTATGAGAGCTTAAATATGAAAGTGGAGCAGCAAGTTCCATTGCTCTTGGTGGAGAGGCAAGCGCTGAATGAAGCCATGGAGGGTGAAAAGCAAGGCCATCACCATATGCCTGAGACGAGAGGACTTTGTCTCTCCGAGGAGCAAACTATCTCCACTGTACGAAGACCAAGGTTTGGAGCTGGATATAGACCGACGGACATGATCACAGAGCCATATAGGCTAACAAGGCGTTGCGAGGTTACTGCAATCCTTGTTTTGTATGGGCTTCCCAGGTTGCTAACTGGATCAATCTTGGCTCATGAGATGATGCATGCTTGGCTTCGCCTTAAAGGTTTCCGTATGCTTAACCCACAAATCGAGGAAGGTATTTGTCAGGTGCTGGCTTACATGTGGCTAGAATCAGAGCTCAGTTCTACCTCTGGTAACAGCAACAGATCAATCTCGTCTTCCAACATTGCTCACAGTTCATTGAGAAGCAACAAAAGATCACCATTCGAGATGAAGCTGGGTAAATTCTTCCGAAACCAGATAGAGTCCGACATTTCCCCCGTATATGGGGATGGTTTCAGAGCTTCTCACCAGGCAGTGCTGAAATACGGCCTTCAAAGTACACTCGACCATATACAGATGACTGGATGCCTTCCTTTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_76672.p1 GENE.S_Transcript_76672~~S_Transcript_76672.p1 ORF type:5prime_partial len:400 (+),score=67.73,DUF3633|PF12315.4|5.9e-94,LIM|PF00412.18|1.4e-07,LIM|PF00412.18|2.1e+02,LIM|PF00412.18|1.5e+03 S_Transcript_76672:3-1202(+)
RALQESLTVESPPRYGHGNGSMAQPITVPYPTGFRICAGCHSEIGYGRFLSCMGGLWHPECFRCHACNLPISGYEFSMCGGYPYHKNCYKEQYHPKCGVCKQFIPTNAAGLIEYRAHPFWDQKYCPVHELDGTPRCCSCERMEPQDTGYVCLDDGRKLCLECLDSAVMDTNQCQPLYLDIQEFYESLNMKVEQQVPLLLVERQALNEAMEGEKQGHHHMPETRGLCLSEEQTISTVRRPRFGAGYRPTDMITEPYRLTRRCEVTAILVLYGLPRLLTGSILAHEMMHAWLRLKGFRMLNPQIEEGICQVLAYMWLESELSSTSGNSNRSISSSNIAHSSLRSNKRSPFEMKLGKFFRNQIESDISPVYGDGFRASHQAVLKYGLQSTLDHIQMTGCLPF*

Click here to download the sequence:
Link to NCBI Protein BLAST