Transcript Information: S_Transcript_76735.p1


Annotated TAIR IDAT1G75660.1
Annotated Gene Name5'-3' exoribonuclease 3
Annotated Gene Symbol(s)XRN3, AtXRN3
Annotation TypeOrtholog
Chromosome Positionchr1:28408289-28414825 | Forward length=1020
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 123.074568486683
Replicate 224.417806420396
Replicate 324.469435421781
Condition 2: 8 Hour
Replicate 154.870948119365
Replicate 252.955087416881
Replicate 351.134083861388
Condition 3: 24 Hour
Replicate 123.808468523457
Replicate 222.303058021293
Replicate 322.718732881762


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_76735.p1 GENE.S_Transcript_76735~~S_Transcript_76735.p1 ORF type:complete len:1068 (+),score=233.18,XRN_N|PF03159.14|4e-99 S_Transcript_76735:354-3557(+)
ATGGGAGTTCCGGCCTTTTACCGGTGGTTAGCGGAGAAGTATCCGTTGATAGTGGTGGATGTTATTGAAGAAGAACCAGTTGATATTGACGGGATTAAGATTCCCGTTGATACTAGTAAACCTAACCCTAATAAGCTTGAGTATGATAATTTATATCTTGATATGAATGGTATCATTCATCCTTGCTTTCATCCTGAGGACCGGCCTTCTCCAACAACATTTGATGAGGTTTTTCAGAATGTTTTCGACTACATTGATAGGCTATTTAATATGGTTCGTCCACGAAAACTGCTGTACATGGCGATTGATGGTGTTGCTCCCAGAGCCAAGATGAACCAGCAGCGTTCTAGGCGTTTCAGGGCTGCTAAAGATGCTGCAGATGCTGCAGCTGAGGAAGAACGGTTGCGACAGGAGTTTGAACAAGAGGGTAGAAAGCTTCCTCCTAAGGAGTCTTCTCAAACATTTGATTCCAATGTTATTACTCCTGGAACGGAGTTCATGGCTGTATTGTCGGTTGCATTACAGTATTATGTTCACCTTAGAATAAATAATGACCCAGGGTGGAAATCGATTAAGGTAATCTTATCTGATGCAAATGTTCCCGGTGAGGGGGAACACAAGATAATGTCATACATTCGTCTTCAAAGAAATCTTCCTGGTCATGATCCGAATACTCGACATTGCCTATATGGATTGGATGCAGATTTGATAATGTTGGCCTTGGCTACTCATGAAGTTCATTTTTCGATCCTCAGAGAGGTTGTATTCACCCCTGGACAGCAAGACAAGTGCTTTCTGTGTGGTCAGGTAGGGCATTTAGCAGCAAACTGTGAAGGGAAGGCTAAGAGGAAATCTGGGGAATTTGATGAAAAAAGTGATGATGCTGCTGTGACCAAAAAGCCATTTCAGTTCCTCAATGTCTGGACTTTAAGGGAATATCTGGAATATGAGTTGAAGATTCCAAATCCACCTTTTAAGATTGATTTAGAGTGCATCATAGATGATTTCATCTTCATATGCTTCTTTGTCGGAAATGATTTTTTGCCCCACATGCCTACCTTGGAAATTCGGGAGGGTGCAATTAACTTGTTGATGGCTGTCTACAAGAAGGAATTTCGTGCAATAGGTGGATACTTGACTGATGGAAGCAAGCCTAACTTGAGCCGGGTAGAGCAATTCATACAAGCTGTTGGTTCGTATGAGGACCAAATCTTTCAGAAAAGAGCTCGCTTACACCAGCGGCAGGCAGATAGAATAAAGCGCGAAAGAGGGCAGTTGAAAAGAGGGGATGATGCTCAACCTCAAGTTGAACCTGAATCATTGGTTCCGGTATCACGATTTCATGGTTCTCGCCTTGCTTCTGCCTCGGCACCTTCACCATTTCAAAAATCCAACGTTAAAGCTGATTCATCTGCCCGGGCTCAAAAAGTTGCACGTTTGTCTTCGTCAGCAACAATTGGTGCTGCTATTGTTGATGCTGAGAATACTCTTGAGATGGATGCAAATGAAAACAAGGAGGAGTTGAAAGCAAAGCTTAAAGAGGCTCTTCGTGAGAAGTCGGATTTATTTAACTCTGATGATCGGGAAGAGGACAAGATCAAATTAGGAGAGCCTGGGTGGAAAGAAAGATACTATGAAGAGAAGTTTTCTGCAAAGTCTCTTGAGGAGATGGAAAGCATACGAAAGGATGTTGTGTTGAAATACACTGAAGGCTTGTGTTGGGTTATGCATTATTACTACGAAGGTGTCTCCTCATGGCAGTGGTTTTATCCATATCATTATGCTCCTTTTGCTTCTGATATCAAGGATATTGCTCAATTAGATATCAGCTTTGAGCTAGGTTCTCCATTCAAACCATTTGATCAACTTATGGGTGTTTTTCCTGCTGCAAGTTCCCATGCACTTCCACAGCATTATAGGAAATTGATGACTGAACCTGACTCCCAGATTATTGATTTTTACCCAACAGATTTTGAAGTGGACATGAATGGGAAACGGTATTCTTGGCAGGGTATTGCCAAATTGCCTTTTATTGATGAAACCCGTCTTCTTTGTGAGATTGCAAAAGTTGAACATACACTAACGCCAGAAGAAAAGAGAAGGAACAGTATCATGTCTGACATGCTGTTTGTTGCTGTTTCTCATTCACTATCGCCATATATCTTTTCCCTTGACGATCGTTGTAAGCAAATGACTGAGGAAGAGCGGGCTCTAGTCAAAGAGAAACTTGATCCGAAGGCCAGGTCTGCTTGCAGCGGGGGGATGAATGGTTATATATGCCTTTGTGCAGGAGACCCTTGTCCTCCTATTTTTAGGGCCCCTGTTGCTGGAATGGAAGATATCGTAGACAATCAAGTCATATGTGCGATTTACAAACTGCCTGAATATCATAAGCACATAACAAGACCTCCACCAGGTGTCAGATTCCCAGAAAAGATTGTCTCGATGGGAGATCTGAAGGAATCTGTTTTGTGGCATGAGGATTCTGGAAGAAGGCATATGGACAATGGAAGAAGGCATATGGAAAATGGAAGACGCCCTATAGATAATGGAAGGCCAAACCCCCCTGGAAGTATATCTGGTCGTCAGCTTGGGGAGGCTGCACATCGTCTAGTTGTTAATAGCTTACAGATGAGGTCAGACCAGAATGGATATGTTTCTCAGGTGCATGCCATGTCTGCTGCTTATGGCCCTCCTGGGTATGGACCTGTCGTTCCATATCCAGATAATCGATACCATGGTCAGGATTATGGTACTATGATGGCTTCACAAGGAGGCTACCCAGTTGGGCATCAGCCTCCGCCCATACCACCAAACCGCCGTAATCCGTCATACACTGGTCCTGCTACCCAACATAAGTATGGTAGACCAGGTTCTCAGGATCATAGAATTAGTTATCCCACTCCAAGTGGTGTGGCCCCAATGCAGGGGTACTATCTCCCAGGACCTCGCCAAAATGGACCTCGTTACCCTCCTGGGCCAGCAGCTGTTCCTGGAGCATACCATGGTCAAAGCGGTTATAGTGGTCAACAGAGATACCAGAGCTATGGTGTTGGCGGCTATAGTCAGTGGGGTGCAGGCCCCCAGTCTAACAATGTCGCTAGAGGATACAATAATAGCTCGCAACAAGGGGGAAACCGGTTTTCATCATTGGACAGAGGATCAAATCGAAGGCCACCACCACCAAGTCATGGCCGTCGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_76735.p1 GENE.S_Transcript_76735~~S_Transcript_76735.p1 ORF type:complete len:1068 (+),score=233.18,XRN_N|PF03159.14|4e-99 S_Transcript_76735:354-3557(+)
MGVPAFYRWLAEKYPLIVVDVIEEEPVDIDGIKIPVDTSKPNPNKLEYDNLYLDMNGIIHPCFHPEDRPSPTTFDEVFQNVFDYIDRLFNMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRAAKDAADAAAEEERLRQEFEQEGRKLPPKESSQTFDSNVITPGTEFMAVLSVALQYYVHLRINNDPGWKSIKVILSDANVPGEGEHKIMSYIRLQRNLPGHDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQVGHLAANCEGKAKRKSGEFDEKSDDAAVTKKPFQFLNVWTLREYLEYELKIPNPPFKIDLECIIDDFIFICFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRAIGGYLTDGSKPNLSRVEQFIQAVGSYEDQIFQKRARLHQRQADRIKRERGQLKRGDDAQPQVEPESLVPVSRFHGSRLASASAPSPFQKSNVKADSSARAQKVARLSSSATIGAAIVDAENTLEMDANENKEELKAKLKEALREKSDLFNSDDREEDKIKLGEPGWKERYYEEKFSAKSLEEMESIRKDVVLKYTEGLCWVMHYYYEGVSSWQWFYPYHYAPFASDIKDIAQLDISFELGSPFKPFDQLMGVFPAASSHALPQHYRKLMTEPDSQIIDFYPTDFEVDMNGKRYSWQGIAKLPFIDETRLLCEIAKVEHTLTPEEKRRNSIMSDMLFVAVSHSLSPYIFSLDDRCKQMTEEERALVKEKLDPKARSACSGGMNGYICLCAGDPCPPIFRAPVAGMEDIVDNQVICAIYKLPEYHKHITRPPPGVRFPEKIVSMGDLKESVLWHEDSGRRHMDNGRRHMENGRRPIDNGRPNPPGSISGRQLGEAAHRLVVNSLQMRSDQNGYVSQVHAMSAAYGPPGYGPVVPYPDNRYHGQDYGTMMASQGGYPVGHQPPPIPPNRRNPSYTGPATQHKYGRPGSQDHRISYPTPSGVAPMQGYYLPGPRQNGPRYPPGPAAVPGAYHGQSGYSGQQRYQSYGVGGYSQWGAGPQSNNVARGYNNSSQQGGNRFSSLDRGSNRRPPPPSHGRR*

Click here to download the sequence:
Link to NCBI Protein BLAST