Transcript Information: S_Transcript_76790.p1


Annotated TAIR IDAT1G73240.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Nucleoporin protein Ndc1-Nup (InterPro:IPR019049); Has 36 Blast hits to 36 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:27542397-27544668 | Reverse length=519
E-Value2E-70
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2924636361456
Replicate 21.4611118912262
Replicate 30.52926174191348
Condition 2: 8 Hour
Replicate 12.0242644230391
Replicate 22.0248251528229
Replicate 32.4939071149316
Condition 3: 24 Hour
Replicate 10.8680086155203
Replicate 20.70042684783414
Replicate 31.6146562643452


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_76790.p1 GENE.S_Transcript_76790~~S_Transcript_76790.p1 ORF type:internal len:453 (+),score=74.18 S_Transcript_76790:1-1356(+)
CCTGAGTTCTCACATAAAGGAAAAGAATCCTTCTTAAACCCTTTCTCTCTAAACACTTCACCACTTCATTCACTCAATACCAGTAGCAGTAGCACCACCATGTCGCCACCATCAGAAATCACCAACAACCGCTTCCTAGGTTTCCTCATATGGCAATCAATTCAAAGCACCACCATTTTCATCCTTTCCAAATCTATTATTCTCTCTCCTTTTACCTACAAACCCTTTCTTCCCTCTTTATTCGGTTTCCTTAACCTCCTCTTCTTCCTTCTCTCTATGCTCCTTTTTTCCTTCTCCCTCCAAACTGTTGCCTCTCCCCAGCATCGCCGCCCTTCTTCTCCCTCCCAACTCGCTATCGGCTTGCTCCGATTCATCTTCACCTCTTCATCCCCACCTCCCCAAATCTGGGTTTCTCTGACCATGCTTCTTCTCATAATCATCTCGGTTTTTTCGGGTTTTCTGGCGGTTGTTTCGGTTGTTGGCACTAGCTACTCAGCGTCCTTTGGTGTGTTGATTAATAACTTGGGGCTTAGGGCTGTTGCTGTTGGTTTGCTTTATGGTTTGTATTGTGTGTTCTATCAACGATGGGTCTTGGCTTTCCCTATTGTTCAGTCAGGTGAGGAGGAGGTTGGATGGATGGAAGAAGGTCTATTACTCAGGCAGGATTACACTGTTACAATCTTGTCTTTTCAGCGTCCCCCTTTTTATAGCTATAAGATGGGGATTCTTTCAGCTGTCAGACAAGCTATCAAGCTCTCAGTGGTGGCATTCTTGTTCTCGGTCATTTTCGTTGTCCTTTTACCTAATCAGTTTAAAGGTGAAGTTGCAGAGGAATATTTTGCTGAGCAATTCATGTTTTGGTCAGCGAGTTTCACAGTATTCCTATCTTGGGAGCTGATACTTCATTTGCACAAGGTTTTGCATACAAAGAGATTTATGTTTGCTCCATCGAAAGGATCTTCTGCTATTGAAACAAATCCTAGTGAACCTCTTTTGGCCGCTTTAGAGGATAGCTCTCCTAGTTCTCTTCTTCAGTATCTTGCATATCTTGATTTATGCATGGTATGTGGAAGTAATGTTGATTCCTGGCGCCGAGCTGCCTTCTTTGAAGAAACTGGTGAAACTTACAAAAGAGTGGTTGGTGCATGCTTGAGACCTTTGGAGCAACTTGCATCAAAGCTGGCTGAAGGGTTAACAACTTCATCTGATAAAACACAGAAGCTGTCCCATCAACTATGCTCACCAGAGGACATTCGTCAAAGTCCTGAAATTCTGGAATTATTCAATGATTTTCAGTTGTATGCATGGTGTGCACAATCTGTTGCATCACTAGAAGTACACTCGCACAAGGAAGAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_76790.p1 GENE.S_Transcript_76790~~S_Transcript_76790.p1 ORF type:internal len:453 (+),score=74.18 S_Transcript_76790:1-1356(+)
PEFSHKGKESFLNPFSLNTSPLHSLNTSSSSTTMSPPSEITNNRFLGFLIWQSIQSTTIFILSKSIILSPFTYKPFLPSLFGFLNLLFFLLSMLLFSFSLQTVASPQHRRPSSPSQLAIGLLRFIFTSSSPPPQIWVSLTMLLLIIISVFSGFLAVVSVVGTSYSASFGVLINNLGLRAVAVGLLYGLYCVFYQRWVLAFPIVQSGEEEVGWMEEGLLLRQDYTVTILSFQRPPFYSYKMGILSAVRQAIKLSVVAFLFSVIFVVLLPNQFKGEVAEEYFAEQFMFWSASFTVFLSWELILHLHKVLHTKRFMFAPSKGSSAIETNPSEPLLAALEDSSPSSLLQYLAYLDLCMVCGSNVDSWRRAAFFEETGETYKRVVGACLRPLEQLASKLAEGLTTSSDKTQKLSHQLCSPEDIRQSPEILELFNDFQLYAWCAQSVASLEVHSHKED

Click here to download the sequence:
Link to NCBI Protein BLAST