Transcript Information: S_Transcript_76864.p1


Annotated TAIR IDAT1G55630.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:20791817-20793250 | Reverse length=477
E-Value8.1E-222
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.3170987629964
Replicate 24.711560808997
Replicate 35.4154235317349
Condition 2: 8 Hour
Replicate 17.7069172398674
Replicate 29.0038651609577
Replicate 37.7472382465743
Condition 3: 24 Hour
Replicate 16.8629716099813
Replicate 26.2360385035535
Replicate 36.7327839274437


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_76864.p1 GENE.S_Transcript_76864~~S_Transcript_76864.p1 ORF type:complete len:487 (+),score=77.02,PPR_2|PF13041.2|8.5e-05,PPR_2|PF13041.2|0.00017,PPR_2|PF13041.2|4.7e-10,PPR_2|PF13041.2|3.4e-09,PPR_2|PF13041.2|4.9e-11,PPR_2|PF13041.2|1.6e-15,PPR_2|PF13041.2|3.6e-15,PPR_2|PF13041.2|0.013,PPR|PF01535.16|24,PPR|PF01535.16|2.1e+02,PPR|PF01535.16|1e+02,PPR|PF01535.16|0.015,PPR|PF01535.16|0.0014,PPR|PF01535.16|1e-05,PPR|PF01535.16|3.1e-05,PPR|PF01535.16|1.2e-09,PPR|PF01535.16|0.00054,PPR_1|PF12854.3|2.8e+03,PPR_1|PF12854.3|21,PPR_1|PF12854.3|4.4,PPR_1|PF12854.3|0.032,PPR_1|PF12854.3|0.0002,PPR_1|PF12854.3|1.6e-07,PPR_1|PF12854.3|4.8e-10,PPR_1|PF12854.3|4.4e-06,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|0.64,PPR_3|PF13812.2|2.5e+02,PPR_3|PF13812.2|17,PPR_3|PF13812.2|4.9,PPR_3|PF13812.2|0.0051,PPR_3|PF13812.2|0.0018,PPR_3|PF13812.2|0.0012,PPR_3|PF13812.2|8.5e-06,PPR_3|PF13812.2|0.033 S_Transcript_76864:719-2179(+)
ATGAACTCTATAGCTCGATTTGGTCTAAGGGCTTTAAAGCCCTTCTCATTTTGGGGTCTTGTTTCAAGGGCTTTTTGTACTTGTAGTGATAAAACTAAAACTAGTGATGGGTTTTCTCATATTGAGAAATTAATTAGAGAAAGCTGGGAAAGTTCTGATTTTGATTCGGGTAAACATAGAGTTGTTAGTGATGATGATGATGAATATGAAATTGGAAGTAATATCTCTCTAAAGAAGCACTTTTTTGAGATTACTTGGAGAGATACTGATAGGGTTTTCGATGTATTAAGGCAAGACGGTCCCGGTTTTAATGTTAAATCCGCTTTAGATGGATTGAACGTAAGGGTTTCGGGCCTTCTTGTGAGAGAAGTCCTCTTGAAGATTTTGAGGATTATAAATTATGAGAATAAGACTTTGTGTGCCAAATTGGCTTACAAGTTTTTTGTATGGTCGAGTGAGCAGGAAAACTATAGACATACTGTGAATGTATACCATTTGGTCATGAAAATCTTTGCAGCTGCCGAGGAGTTTAAGGGAATGTGGCGATTAGTTGATGAAATGACGGAGCTAGGGTATCCAGTGACTGCCCGTACATTTAATATCTTGATTTGTACCTGTGGTGAGGCTGGCTTACAAAGGAAAGTTGTGGAGAAGTTCATTAAATCAAAGACATTCAATTACAGGCCGTTCAAGCATTCCTACAACGCGATTCTGCTTGGTCTTCTAAATATAAGCCAGTATAAGTTGATTGAGTGGGTTTATCAGCAAATGCTTGGTGATGATCATTCACCCGACATTCTAACTTATAATGTACTTATGTATGCAAAATATAGGCTGGGAAAATTGGATCATTTCCATCGGTTGCTTGATGAAATGGGTAGGAATGGATTTTCTCCGGATTTCCATACTTTTAATATTCTTCTTCATGTCCTTGGTAAAGGGGATAAGCCTCTTGCTGCACTGAATCTTTTGAATCACATGAAGGAAGAGGGATTAAATCCAAGTTCCCTTCACTACACTACATTGATTGATGGTCTGAGCCGGGCTGGGAATTTAGAGGCTTGCAAGTATTTTTTTGATGACATGGTCAAGAACAGCTGCCGGCCTGATGTGGTCTGTTACACTGTTTTGGTGACTGGATATATTGAGGCAGGGGAGCTTGAGAAGGCTCAGCAGATGTTTGATGACATGATTGCAGCTGGACATTTGCCGAATGTGTTTACATACAACTCCATGATTTGGGGACTTTGTGTAGCAGGTAAATTTGAGGAGGCGTGCTCTATGCTTAAGGAAATGGAAAACAGAGGTTGTACCCCAAATTTTCTTGTGTATAGTACCTTGATTAATAATCTGCGAAATGCTGGGAAACTTTCTGATGCTCATGAAGTAGTGAGAGAAATGATTGAGAAAGGACAGTATCTCCACCTTATCTCAAAATTTAAGAGATACAGGAGATGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_76864.p1 GENE.S_Transcript_76864~~S_Transcript_76864.p1 ORF type:complete len:487 (+),score=77.02,PPR_2|PF13041.2|8.5e-05,PPR_2|PF13041.2|0.00017,PPR_2|PF13041.2|4.7e-10,PPR_2|PF13041.2|3.4e-09,PPR_2|PF13041.2|4.9e-11,PPR_2|PF13041.2|1.6e-15,PPR_2|PF13041.2|3.6e-15,PPR_2|PF13041.2|0.013,PPR|PF01535.16|24,PPR|PF01535.16|2.1e+02,PPR|PF01535.16|1e+02,PPR|PF01535.16|0.015,PPR|PF01535.16|0.0014,PPR|PF01535.16|1e-05,PPR|PF01535.16|3.1e-05,PPR|PF01535.16|1.2e-09,PPR|PF01535.16|0.00054,PPR_1|PF12854.3|2.8e+03,PPR_1|PF12854.3|21,PPR_1|PF12854.3|4.4,PPR_1|PF12854.3|0.032,PPR_1|PF12854.3|0.0002,PPR_1|PF12854.3|1.6e-07,PPR_1|PF12854.3|4.8e-10,PPR_1|PF12854.3|4.4e-06,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|0.64,PPR_3|PF13812.2|2.5e+02,PPR_3|PF13812.2|17,PPR_3|PF13812.2|4.9,PPR_3|PF13812.2|0.0051,PPR_3|PF13812.2|0.0018,PPR_3|PF13812.2|0.0012,PPR_3|PF13812.2|8.5e-06,PPR_3|PF13812.2|0.033 S_Transcript_76864:719-2179(+)
MNSIARFGLRALKPFSFWGLVSRAFCTCSDKTKTSDGFSHIEKLIRESWESSDFDSGKHRVVSDDDDEYEIGSNISLKKHFFEITWRDTDRVFDVLRQDGPGFNVKSALDGLNVRVSGLLVREVLLKILRIINYENKTLCAKLAYKFFVWSSEQENYRHTVNVYHLVMKIFAAAEEFKGMWRLVDEMTELGYPVTARTFNILICTCGEAGLQRKVVEKFIKSKTFNYRPFKHSYNAILLGLLNISQYKLIEWVYQQMLGDDHSPDILTYNVLMYAKYRLGKLDHFHRLLDEMGRNGFSPDFHTFNILLHVLGKGDKPLAALNLLNHMKEEGLNPSSLHYTTLIDGLSRAGNLEACKYFFDDMVKNSCRPDVVCYTVLVTGYIEAGELEKAQQMFDDMIAAGHLPNVFTYNSMIWGLCVAGKFEEACSMLKEMENRGCTPNFLVYSTLINNLRNAGKLSDAHEVVREMIEKGQYLHLISKFKRYRRC*

Click here to download the sequence:
Link to NCBI Protein BLAST