Transcript Information: S_Transcript_76975.p1


Annotated TAIR IDAT5G14170.1
Annotated Gene NameSWIB/MDM2 domain superfamily protein
Annotated Gene Symbol(s)CHC1
Annotation TypeHomolog
Chromosome Positionchr5:4568696-4570444 | Reverse length=534
E-Value2E-146
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.216744101495
Replicate 213.028457626636
Replicate 313.991041166869
Condition 2: 8 Hour
Replicate 112.960689804809
Replicate 213.066316770185
Replicate 314.011494654136
Condition 3: 24 Hour
Replicate 110.922441745297
Replicate 211.869194424682
Replicate 312.176159367987


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_76975.p1 GENE.S_Transcript_76975~~S_Transcript_76975.p1 ORF type:complete len:464 (+),score=102.51,SWIB|PF02201.14|1.3e-21 S_Transcript_76975:487-1878(+)
ATGTCAGACCCTCAACCTCAGTCCAATAGCAATGCCAATATCAATACCAATGTCCGTGTTACAAATTCCACCCAAGCTACCACTACAACTACTAGTACTACTGCCCCAATTACAGCCCCATCAAGCTCCAAAAAATCCCACCACAAATCATCCAGTAAACCCCAAGGTGGTGGGTCCGGTGGGGCAAGTACTGGTGGCACACCATTGAAGACAATGGAGCTTGCCCCATCTGCCCGTAGGCGAAAAAGAAAAGACCCAGATCACCAAATCCCTGAAAAAGTAGCTGCCCTTTTGCCTGAAAGTGTTCTTTATACTAAGCTACTTGAGTTAGAATCCCAAGTTGATACTGTCATTGCTAGGAAGAAATTGGATATTCAGGAATCTGTTAAGAAGCCTCCCCATGTTCAGAAAACCCTAAGGATTTACGTTTTCAACACTTTTTCGGGTGGTGAAAGTGAAACACCCAATTGGACACTTAAGATAATTGGCAAGGTTTTGGAAGATGGGTCTGGTTCTGGATCTGATAATGTGGTGGATCGGAATGATTGTTACCCGAAGTTCTCATCGTTTTTTAAGAAGATAACTATATACTTGGACCATACATTATACCCTGATAACCATGTCATTTTGTGGGAGAAGTCTCGGTCCCCTGCCCTTCATGAAGGGTTTGAGGTGAAAAGAAAGGGGGATAAGGAGTTTACAGCGATTATAAGGCTTGAAATGAATAATGTTCCTGAGAAGTTTAAGCTGTCACCTGCTCTTATGCAAGCTCTTGGACTTGAGGTCGAGACGCGTGCTAGGGTGGTTACTGCGTTGTGGCATTATGTGAAGGTTAAGAAGTTGCAAGACCCGAATGACCCTTCTGCGTTTACATGTGACCAAGCGCTCAAGAAAGTGTTTGGAGAAGATAAAGTTAAGTTCACTGCAGCATCTCAGAAGCTGGCACAACATTTGTCTCCCTTGCAGCCCATACATTTGGAGCATAGGGTTAAGCTTTCAGGAAACAGTCCCGGTGGACATATGTGTTATGATGTTCTAGTTGATGTGCCCTTTCTTTTAGAGAAAGAAATGTCTGCTTTCTTGGCAAGTGTAGACAAATGCAAGGAAATTGATGATTACGATAATGCTATTGCTAGTGCTATAAAGAAGATCAATGAGCATCGACGAAGACGGGCCTTTTTCCTTGGATTTAGTCAGTCTCCTGCAGAGTTCATCAACACATTGATTACTTCCCAGGATAGAGATTTAAAGGTTGTTGCTGGCGATGCTATTCATAATGCTGAGAAAGAGCGTCGAGCTGACTTTTTCAACCAATCTTGGGTTGAAGATGCTGTCGTGCACTATCTAAATCGCAAAACTGGCAGTGGAGGGGATCCTGTTGGGCCTTCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_76975.p1 GENE.S_Transcript_76975~~S_Transcript_76975.p1 ORF type:complete len:464 (+),score=102.51,SWIB|PF02201.14|1.3e-21 S_Transcript_76975:487-1878(+)
MSDPQPQSNSNANINTNVRVTNSTQATTTTTSTTAPITAPSSSKKSHHKSSSKPQGGGSGGASTGGTPLKTMELAPSARRRKRKDPDHQIPEKVAALLPESVLYTKLLELESQVDTVIARKKLDIQESVKKPPHVQKTLRIYVFNTFSGGESETPNWTLKIIGKVLEDGSGSGSDNVVDRNDCYPKFSSFFKKITIYLDHTLYPDNHVILWEKSRSPALHEGFEVKRKGDKEFTAIIRLEMNNVPEKFKLSPALMQALGLEVETRARVVTALWHYVKVKKLQDPNDPSAFTCDQALKKVFGEDKVKFTAASQKLAQHLSPLQPIHLEHRVKLSGNSPGGHMCYDVLVDVPFLLEKEMSAFLASVDKCKEIDDYDNAIASAIKKINEHRRRRAFFLGFSQSPAEFINTLITSQDRDLKVVAGDAIHNAEKERRADFFNQSWVEDAVVHYLNRKTGSGGDPVGPS*

Click here to download the sequence:
Link to NCBI Protein BLAST