Transcript Information: S_Transcript_7707.p1


Annotated TAIR IDAT4G16143.1
Annotated Gene Nameimportin alpha isoform 2
Annotated Gene Symbol(s)IMPA-2
Annotation TypeOrtholog
Chromosome Positionchr4:9134450-9137134 | Reverse length=535
E-Value1.8e-319
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 160.155425433483
Replicate 266.646275625625
Replicate 360.721838614874
Condition 2: 8 Hour
Replicate 132.309978159732
Replicate 226.297474910471
Replicate 330.083498129294
Condition 3: 24 Hour
Replicate 165.740734278298
Replicate 263.672481956946
Replicate 358.86729986628


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_7707.p1 GENE.S_Transcript_7707~~S_Transcript_7707.p1 ORF type:complete len:530 (+),score=146.58,Arm|PF00514.19|2.4e-11,Arm|PF00514.19|3.9e-13,Arm|PF00514.19|3e-07,Arm|PF00514.19|8.9e-07,Arm|PF00514.19|3e-08,Arm|PF00514.19|1e-10,Arm|PF00514.19|2.4e-11,Arm|PF00514.19|2.9e-07,HEAT_2|PF13646.2|1.3e-05,HEAT_2|PF13646.2|7.1e-08,HEAT_2|PF13646.2|0.0011,HEAT_2|PF13646.2|0.03,HEAT_2|PF13646.2|0.013,HEAT_2|PF13646.2|0.018,HEAT_2|PF13646.2|1.8,HEAT_EZ|PF13513.2|1.1e+04,HEAT_EZ|PF13513.2|2.1e-09,HEAT_EZ|PF13513.2|49,HEAT_EZ|PF13513.2|0.00013,HEAT_EZ|PF13513.2|20,HEAT_EZ|PF13513.2|0.011,HEAT_EZ|PF13513.2|21,HEAT_EZ|PF13513.2|6.8,Arm_3|PF16186.1|8.1e-20,IBB|PF01749.16|1.8e-19,HEAT|PF02985.18|1.3e+02,HEAT|PF02985.18|0.00014,HEAT|PF02985.18|2.7e+03,HEAT|PF02985.18|15,HEAT|PF02985.18|3.4,HEAT|PF02985.18|6.3,HEAT|PF02985.18|2.8e+03,HEAT|PF02985.18|8.6e+03,Arm_2|PF04826.9|0.18,Arm_2|PF04826.9|49,Arm_2|PF04826.9|0.56,Arm_2|PF04826.9|0.46,Atx10homo_assoc|PF09759.5|1.5e+02,Atx10homo_assoc|PF09759.5|2.7,Atx10homo_assoc|PF09759.5|0.45 S_Transcript_7707:552-2141(+)
ATGTCGTTGAGGCCAAACGCAAGAACGGAGGTTCGCCGGAACCGGTACAAAGTTTCCGTCGACGCCGACGAAGGTCGCCGGCGAAGAGAGGATAATATGGTGGAGATCCGTAAGAGTAAAAGAGAAGAAAGCTTGCTCAAGAAGCGTCGTGATGGTCTTCAACAACAGTTTCCTTCTTCTTTACACTCTACTTCTACTGTTGAGAAGAAGCTGGAGAGTCTGCCTAATTTGTCAGCTGCTGTTCATTCTGACAATAACCAAATGCACTTGGAGGCCACTACACAGTTCCGTAAACTGCTCTCCATAGAAAGAAGCCCACCAATTGAAGAAGTTATTCAGGCTGGTGTTGTTCCACGCTTCGTCGAGTTCCTTCAGAGGGAGGATTTTCCTCAGCTGCAGTTTGAGGCTGCTTGGGCCCTCACAAACATCGCATCAGGGACCTCAGAGAACACCAAGGTGGTAATTGATCATGGAGCTGTTCCCATCTTCGTGAAGCTTCTCGCTTCTCCAAGTGATGATGTCCGTGAGCAGGCAGTTTGGGCATTGGGTAATGTTGCTGGTGACTCTCCAAGGTGTCGAGATCTAGTCCTTGAGAGTGGTGCTTTGATTCCACTGCTTGCTCAATTAAATGAGCGTTCAAAGCTTTCCATGCTCAGAAATGCCACATGGACTTTGTCCAACTTTTGTAGAGGAAAGCCACAGCCCCCTTTTGACCAGGTGAGGCCAGCGCTTCCTGCCCTTGAACGTCTTGTTCATTCAAGTGATGAAGAAGTGTTGACTGATGCATGCTGGGCACTTTCTTACCTTTCTGATGGTCCAAATGACAAAATTCAAGCTGTGATTGAAGCAGGTGTTTGCCCACGATTAGTTGAGCTTCTCATGCATCCTTCTCCATCAGTGCTGATTCCTGCTCTTCGTACAGTTGGCAATGTTGTTACTGGAGATGATGCCCAAACGCAGTTCATAATTTCCAGCGGTGCACTTCCATGCCTATTGAGTTTATTGAGTCATAATCACAAGAAGAGCATCAAGAAAGAAGCTTGCTGGACGGTATCAAATATTACAGCTGGAAACAAGGCACAGATACAGGCTGTTATTGAAGCTGGTTTGGTTGGTCCACTTGTCAACTTGCTTCAAACTGCAGAATTTGACATAAAGAAGGAGGCTGCTTGGGCGATATCTAATGCTACATCTGGTGGTACTCCCGAGCAAATAAAATACCTTGTCAGTCAAGGGTGCATAAAGCCATTGTGCGATCTTCTGGTGTGCCCTGATCCAAGGATTATCACTGTTTGCCTGGAAGGGCTAGAGAACATCTTAAAGGTTGGTGAAGCAGAAAAGAACCTGGGCAATGCTTCAGAAGTTAATTACTCTGCCCAGTTGATAGATGAAGCTGAGGGATTGGAAAAGATCGAAAATCTACAAAGTCATGACAACAATGAGATATATGAGAAGGCAGTCAAGATACTTGAGACATATTGGTTGGAGGAAGAGGAAGATACATTGCCAACTGCGGATGGTGCTGAGCCTGGTGTGCAGATGTGGAACAATGAGCTCCCTGTTCCATCTGGTGGATTTAAGTTTGGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_7707.p1 GENE.S_Transcript_7707~~S_Transcript_7707.p1 ORF type:complete len:530 (+),score=146.58,Arm|PF00514.19|2.4e-11,Arm|PF00514.19|3.9e-13,Arm|PF00514.19|3e-07,Arm|PF00514.19|8.9e-07,Arm|PF00514.19|3e-08,Arm|PF00514.19|1e-10,Arm|PF00514.19|2.4e-11,Arm|PF00514.19|2.9e-07,HEAT_2|PF13646.2|1.3e-05,HEAT_2|PF13646.2|7.1e-08,HEAT_2|PF13646.2|0.0011,HEAT_2|PF13646.2|0.03,HEAT_2|PF13646.2|0.013,HEAT_2|PF13646.2|0.018,HEAT_2|PF13646.2|1.8,HEAT_EZ|PF13513.2|1.1e+04,HEAT_EZ|PF13513.2|2.1e-09,HEAT_EZ|PF13513.2|49,HEAT_EZ|PF13513.2|0.00013,HEAT_EZ|PF13513.2|20,HEAT_EZ|PF13513.2|0.011,HEAT_EZ|PF13513.2|21,HEAT_EZ|PF13513.2|6.8,Arm_3|PF16186.1|8.1e-20,IBB|PF01749.16|1.8e-19,HEAT|PF02985.18|1.3e+02,HEAT|PF02985.18|0.00014,HEAT|PF02985.18|2.7e+03,HEAT|PF02985.18|15,HEAT|PF02985.18|3.4,HEAT|PF02985.18|6.3,HEAT|PF02985.18|2.8e+03,HEAT|PF02985.18|8.6e+03,Arm_2|PF04826.9|0.18,Arm_2|PF04826.9|49,Arm_2|PF04826.9|0.56,Arm_2|PF04826.9|0.46,Atx10homo_assoc|PF09759.5|1.5e+02,Atx10homo_assoc|PF09759.5|2.7,Atx10homo_assoc|PF09759.5|0.45 S_Transcript_7707:552-2141(+)
MSLRPNARTEVRRNRYKVSVDADEGRRRREDNMVEIRKSKREESLLKKRRDGLQQQFPSSLHSTSTVEKKLESLPNLSAAVHSDNNQMHLEATTQFRKLLSIERSPPIEEVIQAGVVPRFVEFLQREDFPQLQFEAAWALTNIASGTSENTKVVIDHGAVPIFVKLLASPSDDVREQAVWALGNVAGDSPRCRDLVLESGALIPLLAQLNERSKLSMLRNATWTLSNFCRGKPQPPFDQVRPALPALERLVHSSDEEVLTDACWALSYLSDGPNDKIQAVIEAGVCPRLVELLMHPSPSVLIPALRTVGNVVTGDDAQTQFIISSGALPCLLSLLSHNHKKSIKKEACWTVSNITAGNKAQIQAVIEAGLVGPLVNLLQTAEFDIKKEAAWAISNATSGGTPEQIKYLVSQGCIKPLCDLLVCPDPRIITVCLEGLENILKVGEAEKNLGNASEVNYSAQLIDEAEGLEKIENLQSHDNNEIYEKAVKILETYWLEEEEDTLPTADGAEPGVQMWNNELPVPSGGFKFG*

Click here to download the sequence:
Link to NCBI Protein BLAST