Transcript Information: S_Transcript_77071.p1


Annotated TAIR IDAT5G15170.1
Annotated Gene Nametyrosyl-DNA phosphodiesterase-related
Annotated Gene Symbol(s)TDP1
Annotation TypeHomolog
Chromosome Positionchr5:4926300-4929307 | Reverse length=605
E-Value5E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.6546022822959
Replicate 23.3404927851167
Replicate 33.4417782127846
Condition 2: 8 Hour
Replicate 15.3313475792832
Replicate 26.8533479987895
Replicate 36.9801895326171
Condition 3: 24 Hour
Replicate 13.1536627574449
Replicate 24.3093162856435
Replicate 33.7300206514608


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_77071.p1 GENE.S_Transcript_77071~~S_Transcript_77071.p1 ORF type:5prime_partial len:284 (+),score=46.66 S_Transcript_77071:1-852(+)
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCAACCTTCACCGGAATCTCCATCTCAAACCTCATCATCACTTTCTCTATCCTCCACTTAGGGTTTCACTACGCTCGCATGCAACTCGACCTCCATCAATGACTCTCTCTCAGGTCGGAGTGCTGATACCGTTGAATAAAAGCTTGAAGGAGGACAAGTCATTGCCAGAACTCAAAGTACTGGAAGGCGATAATGTGATAGGGCGTAATAATGTTCCGGTGACAGATAAAAGACTCAGTCGAAAGCATATTACCTTGTCTGCTTCTACTGACGGTTCTGCCGATTTGCTCGTCGAAGGGATGAATCCTGTGGTGATTAAATCGGGAGGTCAAAGGAGGATATTGACTTCCGGTGAGAGGGCTAATGTTAATAGTGGCAATCTTATTGAGTTAATACCAGGAAGTTACTTTTTTAAGTATGTAACTTTAAGTGGTCGAAATTCCGCTATGGTTGGCAAAGGGTGTGACAGTGATAGTGAATGTAAAAGTGCTGGAAGTGGCACAAAACGAACAAGAGAAGAGTCTACCTCTGGAGCTTCTGCTGGAAAGTCACTGATTCAACATAGAAGTGAGACAAAAGTAAATGAAGAATCTTCTGTGAGCAGAAATAATGTAAATGCTGAATCTAAAAGACAAAATGTTTCAGCTTCGGGCAACTGTGAGGAGGCACTTCGTCACTTTCACATTTCTGATGATAAATTACCTTCAAGTTTTCGTCTTATGAAAGTCCGAGGGCTTCCAGAATGGGCAAATACCTCTTGTGTTTCCATTGACGAGGTTATCAAGCATGTCCAAAACTCAAGCAAGTTCCTCATGTGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_77071.p1 GENE.S_Transcript_77071~~S_Transcript_77071.p1 ORF type:5prime_partial len:284 (+),score=46.66 S_Transcript_77071:1-852(+)
SLSLSLSLSLFNLHRNLHLKPHHHFLYPPLRVSLRSHATRPPSMTLSQVGVLIPLNKSLKEDKSLPELKVLEGDNVIGRNNVPVTDKRLSRKHITLSASTDGSADLLVEGMNPVVIKSGGQRRILTSGERANVNSGNLIELIPGSYFFKYVTLSGRNSAMVGKGCDSDSECKSAGSGTKRTREESTSGASAGKSLIQHRSETKVNEESSVSRNNVNAESKRQNVSASGNCEEALRHFHISDDKLPSSFRLMKVRGLPEWANTSCVSIDEVIKHVQNSSKFLMC*

Click here to download the sequence:
Link to NCBI Protein BLAST