Transcript Information: S_Transcript_77072.p1


Annotated TAIR IDAT5G15170.1
Annotated Gene Nametyrosyl-DNA phosphodiesterase-related
Annotated Gene Symbol(s)TDP1
Annotation TypeHomolog
Chromosome Positionchr5:4926300-4929307 | Reverse length=605
E-Value1E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2460937033195
Replicate 22.0660806274596
Replicate 30.98690226534317
Condition 2: 8 Hour
Replicate 14.0653754116274
Replicate 23.2173561588904
Replicate 34.562589453909
Condition 3: 24 Hour
Replicate 12.6301531961919
Replicate 22.0465649249544
Replicate 33.0367678882414


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_77072.p1 GENE.S_Transcript_77072~~S_Transcript_77072.p1 ORF type:internal len:299 (+),score=36.37 S_Transcript_77072:2-895(+)
CCAGACCCAAAGACGAGACAAACTTCTACCGTTGGGCCTAAAAGACGCGCAGATACTTGTCGGTTCGTCATTTTCCATTTTCTTCTCTCGAAATTCCGACTCTCTCTCTCCAACCTTCACCGGAATCTCCACCTCAAATCTAATCATCACTTTCTCTCTCCTCCACTTAGGGTTTCACTACGCTCGCAAGCAACTCGACCTCCATCAATGTCTCGCTTTCAGGTCGGAGTGCTGATACCGTTAAATAAAAGCTTGAAGGAGGACAAGTCATTGCCAGAACTCAAAGTACTGGAAGGCGATAATGTGATAGGGCGTAATAATGTTCCGGTGACAGATAAAAGACTCAGTCGAAAGCATATTACCTTGTCTGCTTCTACTGACGGTTCTGCCGATTTGCTCGTCGAAGGGATGAATCCTGTGGTGATTAAATCGGGAGGTCAAAGGAGGATATTGACTTCCGGTGAGAGGGCTAATGTTAATAGTGGCAATCTTATTGAGTTAATACCAGGAAGTTACTTTTTTAAGTATGTAACTTTAAGTGGTCGAAATTCCGCTATGGTTGGCAAAGGGTGTGACAGTGATAGTGAATGTAAAAGTGCTGGAAGTGGCACAAAACGAACAAGAGAAGAGTCTACCTCTGGAGCTTCTGCTGGAAAGTCACTGATTCAACATAGAAGTGAGACAAAAGTAAATGAACAATCTTCAATGAGCAGAAATAATGTAAATGCTGAATCTAAAAGACAAAATGTTTCAGCTTCGGGCAACTGTGAGGAGGCACTTCGTCACTTTCACATTTCTGATGATAAATTACCTTCAAGTTTTCGTCTTATGAAAGTCCGAGGGCTTCCAGAATGGGCAAATACCTCTTGTGTTTCCATTGACGAGGTTATCAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_77072.p1 GENE.S_Transcript_77072~~S_Transcript_77072.p1 ORF type:internal len:299 (+),score=36.37 S_Transcript_77072:2-895(+)
PDPKTRQTSTVGPKRRADTCRFVIFHFLLSKFRLSLSNLHRNLHLKSNHHFLSPPLRVSLRSQATRPPSMSRFQVGVLIPLNKSLKEDKSLPELKVLEGDNVIGRNNVPVTDKRLSRKHITLSASTDGSADLLVEGMNPVVIKSGGQRRILTSGERANVNSGNLIELIPGSYFFKYVTLSGRNSAMVGKGCDSDSECKSAGSGTKRTREESTSGASAGKSLIQHRSETKVNEQSSMSRNNVNAESKRQNVSASGNCEEALRHFHISDDKLPSSFRLMKVRGLPEWANTSCVSIDEVIK

Click here to download the sequence:
Link to NCBI Protein BLAST