Transcript Information: S_Transcript_77073.p1


Annotated TAIR IDAT5G15170.1
Annotated Gene Nametyrosyl-DNA phosphodiesterase-related
Annotated Gene Symbol(s)TDP1
Annotation TypeOrtholog
Chromosome Positionchr5:4926300-4929307 | Reverse length=605
E-Value3.4E-123
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.8677803055151
Replicate 22.520103117561
Replicate 32.7028147708725
Condition 2: 8 Hour
Replicate 13.7227513269133
Replicate 24.3875823840843
Replicate 34.0426607526689
Condition 3: 24 Hour
Replicate 12.495212984917
Replicate 23.9075537200599
Replicate 32.2286720271762


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_77073.p1 GENE.S_Transcript_77073~~S_Transcript_77073.p1 ORF type:3prime_partial len:464 (+),score=83.13,Tyr-DNA_phospho|PF06087.8|1.9e-46 S_Transcript_77073:130-1389(+)
ATGACTCTCTCTCAGGTCGGAGTGCTGATACCGTTGAATAAAAGCTTGAAGGAGGACAAGTCATTGCCAGAACTCAAAGTACTGGAAGGCGATAATGTGATAGGGCGTAATAATGTTCCGGTGACAGATAAAAGACTCAGTCGAAAGCATATTACCTTGTCTGCTTCTACTGACGGTTCTGCCGATTTGCTCGTCGAAGGGATGAATCCTGTGGTGATTAAATCGGGAGGTCAAAGGAGGATATTGACTTCCGGTGAGAGGGCTAATGTTAATAGTGGCAATCTTATTGAGTTAATACCAGGAAGTTACTTTTTTAAGTATGTAACTTTAAGTGGTCGAAATTCCGCTATGGTTGGCAAAGGGTGTGACAGTGATAGTGAATGTAAAAGTGCTGGAAGTGGCACAAAACGAACAAGAGAAGAGTCTACCTCTGGAGCTTCTGCTGGAAAGTCACTGATTCAACATAGAAGTGAGACAAAAGTAAATGAAGAATCTTCTGTGAGCAGAAATAATGTAAATGCTGAATCTAAAAGACAAAATGTTTCAGCTTCGGGCAACTGTGAGGAGGCACTTCGTCACTTTCACATTTCTGATGATAAATTACCTTCAAGTTTTCGTCTTATGAAAGTCCGAGGGCTTCCAGAATGGGCAAATACCTCTTGTGTTTCCATTGACGAGGTTATCAAGGGGGATGTGCTTGTTGCTATCCTTTCAAATTACATGGTGGACCTAGATTGGTTATTATCTGCATGTCCAAAACTTAAGCAAGTTCCTCATGTGCTGGTTGTTCATGGAGAAAGTGATGGGACCCTTGAGTATATGAAGAGAAACAAGCCAAGCAACTGGATTTTGCATAAGCCACCATTACCTATTTCATATGGGACGCATCATTCAAAGGCTATGCTTCTTGTGTACCCTCGGGGAGTGAGGGTCATTGTTCACACAGCAAATTTGATATATGTTGACTGGAATAATAAAAGTCAAGGATTGTGGATGCAAGATTTTCCTTGGAAAGACCAGAAAGAGGGAAGCAAAGGATGTGAATTTGAAACTGACCTTGTTGATTACCTACAGGCTCTAAAGTTGCCTGAAGGCATAGCCAATTTGCCAGCGTTTGGTAGATCCAAAATTGACGCTTCCTTCTTTAAGAAGTTTGATTATGGAAATGCAGCGGTCAGATTGATTGCATCAGTTCCTGGATATCATTCAGGGTCGAATTTAAAGAAATGGGGTCATATGAAAATACGTTCCATTCTGGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_77073.p1 GENE.S_Transcript_77073~~S_Transcript_77073.p1 ORF type:3prime_partial len:464 (+),score=83.13,Tyr-DNA_phospho|PF06087.8|1.9e-46 S_Transcript_77073:130-1389(+)
MTLSQVGVLIPLNKSLKEDKSLPELKVLEGDNVIGRNNVPVTDKRLSRKHITLSASTDGSADLLVEGMNPVVIKSGGQRRILTSGERANVNSGNLIELIPGSYFFKYVTLSGRNSAMVGKGCDSDSECKSAGSGTKRTREESTSGASAGKSLIQHRSETKVNEESSVSRNNVNAESKRQNVSASGNCEEALRHFHISDDKLPSSFRLMKVRGLPEWANTSCVSIDEVIKGDVLVAILSNYMVDLDWLLSACPKLKQVPHVLVVHGESDGTLEYMKRNKPSNWILHKPPLPISYGTHHSKAMLLVYPRGVRVIVHTANLIYVDWNNKSQGLWMQDFPWKDQKEGSKGCEFETDLVDYLQALKLPEGIANLPAFGRSKIDASFFKKFDYGNAAVRLIASVPGYHSGSNLKKWGHMKIRSILE

Click here to download the sequence:
Link to NCBI Protein BLAST