Transcript Information: S_Transcript_77074.p2


Annotated TAIR IDAT5G15170.1
Annotated Gene Nametyrosyl-DNA phosphodiesterase-related
Annotated Gene Symbol(s)TDP1
Annotation TypeHomolog
Chromosome Positionchr5:4926300-4929307 | Reverse length=605
E-Value3E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1813935438672
Replicate 23.0743231350635
Replicate 31.3605297110853
Condition 2: 8 Hour
Replicate 13.8455621883355
Replicate 22.5672613193129
Replicate 32.9702410597105
Condition 3: 24 Hour
Replicate 12.3277334867027
Replicate 21.8576894734711
Replicate 31.8606426200496


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_77074.p2 GENE.S_Transcript_77074~~S_Transcript_77074.p2 ORF type:5prime_partial len:122 (+),score=12.99 S_Transcript_77074:2-367(+)
GAACACTTGTCAGTTCGTCATTTTCCATTTTTCTCCTCTCGAATTTCCGACTCTCTCTCTCTCTTCATCCCTCACCGGAATCTCCATCTCAAACCTCATCATCACTTTCTGTCTCCTCCACTTAGGGTTTCACTACGCTCGCATGCAACTCGACCTCCATCAATGACTCTCTCTCAGGTCGGAGTGCTGATACCGTTGAATAAAAGCTTGAAGGAGGACAAGTCATTGCCAGAACTCAAAGTACTGGAAGGCGATAATGTGATAGGGCGTAATAATGTTCCGGTGACAGATAAAAGACTCAGTCGAAAGCATATTACCTTGTCTGCTTCTACTGACGGTTCTGCCGATTGCTCGTCGAAGGGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_77074.p2 GENE.S_Transcript_77074~~S_Transcript_77074.p2 ORF type:5prime_partial len:122 (+),score=12.99 S_Transcript_77074:2-367(+)
EHLSVRHFPFFSSRISDSLSLFIPHRNLHLKPHHHFLSPPLRVSLRSHATRPPSMTLSQVGVLIPLNKSLKEDKSLPELKVLEGDNVIGRNNVPVTDKRLSRKHITLSASTDGSADCSSKG*

Click here to download the sequence:
Link to NCBI Protein BLAST