Transcript Information: S_Transcript_77097.p1


Annotated TAIR IDAT5G58450.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:23626826-23632071 | Forward length=1065
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.468295854277
Replicate 213.658951409131
Replicate 313.323787682444
Condition 2: 8 Hour
Replicate 114.167951244158
Replicate 213.475956070387
Replicate 312.860841123872
Condition 3: 24 Hour
Replicate 110.40642087544
Replicate 210.283481433756
Replicate 310.9725823101


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_77097.p1 GENE.S_Transcript_77097~~S_Transcript_77097.p1 ORF type:complete len:1016 (+),score=196.93,NatB_MDM20|PF09797.5|1.7e+03,NatB_MDM20|PF09797.5|6.3e-56,TPR_9|PF13371.2|0.39,TPR_9|PF13371.2|0.0092,TPR_19|PF14559.2|0.04,TPR_19|PF14559.2|26,TPR_19|PF14559.2|2.1e+02,TPR_19|PF14559.2|1,TPR_19|PF14559.2|2.4e+03,TPR_19|PF14559.2|1.6e+04,NARP1|PF12569.4|1,NARP1|PF12569.4|0.0026,NARP1|PF12569.4|1.1e+03,TPR_16|PF13432.2|0.028,TPR_16|PF13432.2|2.6e+03,TPR_16|PF13432.2|1.4,TPR_16|PF13432.2|3,ANAPC3|PF12895.3|0.0043,ANAPC3|PF12895.3|5 S_Transcript_77097:268-3315(+)
ATGTCGAATCCCCTGGCCGGAAAGTTTGGGTATGCCGGAGGCATGCCGGAGCGAAAAGTCCGGCCGATTTGGGACGCTATTGATTCTCGCCAGTACAAGAACGCTCTTAAGCTCTCTTCTGCTCTTCTCACTAAGTACCCTAATCTTCCTTACGCCATGGCACTAAAAGCTCTTATTTTGGAAAGAATGGGGAAACCTGAAGAAGCACTATCCATCTGCCTCGAAGCAAAAGAGCTGTTGCATAAAAATGTTACTCTGTTGATGGATGATCTTACACTCAGCACCTTGCAGATTGTGTTTCAAAGACTTGACCGCTTGGATTTGGCGACAAGCTTGTATGATTATGCCTGTGGAAAAATTCCAAATAATCTGGAGTTAATGATGGGGCTTTTCAATTGTTATGTTCGTGAATATGCATATGTGAAACAGCAACAGACAGCTATTAAAATGTACAAGCTTGTTGGTGAAGAAAGGTTCTTGCTGTGGGCAGTTTGTAGTATACAGCTTCAGGTTAGTTGTGGCCAAGGAGGAGAAAAGTTGTTAGGCTTAGCAGAAGGTTTACTTAAAAAGCACATTGGTTCCCACAGTCTGCATGAACCAGAAGCCCTTATGGTATACATATCTGTGCTGGAACAACAAGGCAAATATTGTGACGCACTAGAGATTCTATCTGGAAAATTGGGGTCACTTATCCTGATTGATGTTGAGCGGCTTCGCTTGCAGGGTAGACTGCTTGCTCAGTCAGGCGACAATGCTGCTGCTGCTAGTACATTCCAGAAGATCCTAGAATCATGCCCTGATGACTGGGAGTGTTTCCTACATTATCTAGGATGTTTGCTGGAGGATGACCAGAACTGGTGCAGTGGGTCAACTAGTGAACCAAGGTGTCCTCCAAAATCCGTGGACAAGCCCGCGCATGTGACAGAAGATGTGTTTGATTCTCGTATACAAGATGCATCAACTTTTGTGCAGAAGTTACAAGCAGAAGCTAGTGATGATCCTAAGAGGGGCCCTTATTTGGCTTCTCTTGAAATTGAACGGAGGAAACACTTACATGGAAAAGGGGATAGGGAGAAATTCATTGATGCTATCGTGCAGTATTTTTCCAGATTCGGCTACCTAGCTTGTTTTTGTTCTGATGTTGAATTGTTTCTTGACATCTTGAGTCCTGATGAGAAAATGAGATTGCTAGAAAATCTCAACAAGAGCTGTGCATCCATGGCAATGGTGCCTACAAAATCCCTTGGTCAATCATTAAGTCTTCAGAAGATACAACTGGAAACCGGCAATCACAACAATTTTCCGGCAGATCTTGGGAGTTTTGCAGTGAAGATGGTTCAGATGTATTGTGAAAATCTCTTTCTTTCAAAGGACTTGGATCCACAAGAGAGTCTGCATGGTGAGGAGCTCCTATCCATGGCATCCAGTATATTGGTTCAGCTATTTTGGCGAACCGGTAATGTTGGCTATTTGCTGGAGGCTGTTATGGTGCTGGAATTAGGATTAGCTATCAGGAGGTTTGTGTCCCAGTACAAGACATTGCTGGTACACTTGTATTCTCATTTGGGTGCTCTTCCGGTGGCATATGAATGGTATCGAACATTGGATGTGAAAAATATTCTTTTTGAGACTATGTCACACCAAATTCTGCCACAGATGTTGATATCTCCTCTTTGGGAAGATTTAAATGATATTTTGCGGGATTATCTAAAGTTCATGGATGACTACCTTAGAGAATCTGCAGACCTTACATTTCTTGCATATCGCCATCGGAATTACTCAAAAGTAATTGAGTTTGTCCTGTTCAAAGAGCGTCTGGAACATTCTAATCAGTTTCTGGCTGCCAGGCTTGAATCAGCTATTCTAAGACTGAAGGAGAAGGCTGATAATATTGAGGAGATAGAGCGTACTCTTGAAAGCTTGAAATGTGGAACACAAGCTCTTGAACTTGCAAGTGAGACTTCATGTAAATCCCTGACATTCAATGAAGACCTGCAGTTAAGACCTTGGTGGACACCGACACCAAAAAAAAATTATCTTTTAGGATCATTTGATGAACTTCCTCATCCTAGAGAAAATTTGCAATATTATAGGGAAGACTGGGAAACAAATGTGCAGAAGACTGTTCAGAAAAGATCTCTTCTTCCTCGGATGATCTATTTGTCTGTTCAGTGTGTTTCAGCTTCTATTAAGGAAAGCATTGAGGCCAATGGTTCTGTATCTGATTCCACTTTTGCTTTGGAAATGAAAACCTTGCTCGAGCACTATGCGAAGATCCTTGGGTTTTCTCTAAAAGAGGCTGTGAAAATTGTGTTCGATGTTGCTGAGGGCAACAAGTCTTTAGAGACTTTTGGCTCAGATGTGATCGATTGGGCAAACTTGGCTGTATTTTTCAATGCATGGAGCTTGGCTTCCCACGAGCCCATGCTTCCAGGGGGTGAAGGAATAACAGGTCCCGTGGTATGTTATTGGCACATGATGAATTCTTTGCTAGAGAAGTGTGTACTACGAAAGGTCAGAATAACAGGTCCCGTTGTATGTTATCCAGGAGGTGATCTCCCGGTTCTAGTGCAACTAATTACAGAATCTGTGGCTTGGCATAGTCTAGTACTTCAGTCTTACGTTCGCTCATCTCTTCCTTGTGGGAAGAAAAAGAAGAAAAGCGGACATGCAGACATTTGCAGTTCTTCATTATCTCAGGGAGTTCGGGATTCAGTTTTGTCTCTTTATTCTACTGTCCAAGTGGTTGCAAAATGGTTGAGTGAAGAGCTCAACAAAAGGGAGGATGATGCAGTGGACCAGTTGCTCTCCTCTCTTGTGAGTTGTCCACATGAAGGTCCTGGGCAGATATTCCAGGTTCTTAATGATTCAATATCTAGTGCAAACGAGGTTGAACTAGGAGATCGAATCTTCCAAGCAGTTAAGTCTTGGAGTCCGACTGATGTGGCCAGTAAGATGATAAAGGGACAGCGTAGGACATTGTCAGATCTTCTGCAAATCTGCAACTCTAAACTGAAGTTATTGGAGACCTTGAAACAACAATTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_77097.p1 GENE.S_Transcript_77097~~S_Transcript_77097.p1 ORF type:complete len:1016 (+),score=196.93,NatB_MDM20|PF09797.5|1.7e+03,NatB_MDM20|PF09797.5|6.3e-56,TPR_9|PF13371.2|0.39,TPR_9|PF13371.2|0.0092,TPR_19|PF14559.2|0.04,TPR_19|PF14559.2|26,TPR_19|PF14559.2|2.1e+02,TPR_19|PF14559.2|1,TPR_19|PF14559.2|2.4e+03,TPR_19|PF14559.2|1.6e+04,NARP1|PF12569.4|1,NARP1|PF12569.4|0.0026,NARP1|PF12569.4|1.1e+03,TPR_16|PF13432.2|0.028,TPR_16|PF13432.2|2.6e+03,TPR_16|PF13432.2|1.4,TPR_16|PF13432.2|3,ANAPC3|PF12895.3|0.0043,ANAPC3|PF12895.3|5 S_Transcript_77097:268-3315(+)
MSNPLAGKFGYAGGMPERKVRPIWDAIDSRQYKNALKLSSALLTKYPNLPYAMALKALILERMGKPEEALSICLEAKELLHKNVTLLMDDLTLSTLQIVFQRLDRLDLATSLYDYACGKIPNNLELMMGLFNCYVREYAYVKQQQTAIKMYKLVGEERFLLWAVCSIQLQVSCGQGGEKLLGLAEGLLKKHIGSHSLHEPEALMVYISVLEQQGKYCDALEILSGKLGSLILIDVERLRLQGRLLAQSGDNAAAASTFQKILESCPDDWECFLHYLGCLLEDDQNWCSGSTSEPRCPPKSVDKPAHVTEDVFDSRIQDASTFVQKLQAEASDDPKRGPYLASLEIERRKHLHGKGDREKFIDAIVQYFSRFGYLACFCSDVELFLDILSPDEKMRLLENLNKSCASMAMVPTKSLGQSLSLQKIQLETGNHNNFPADLGSFAVKMVQMYCENLFLSKDLDPQESLHGEELLSMASSILVQLFWRTGNVGYLLEAVMVLELGLAIRRFVSQYKTLLVHLYSHLGALPVAYEWYRTLDVKNILFETMSHQILPQMLISPLWEDLNDILRDYLKFMDDYLRESADLTFLAYRHRNYSKVIEFVLFKERLEHSNQFLAARLESAILRLKEKADNIEEIERTLESLKCGTQALELASETSCKSLTFNEDLQLRPWWTPTPKKNYLLGSFDELPHPRENLQYYREDWETNVQKTVQKRSLLPRMIYLSVQCVSASIKESIEANGSVSDSTFALEMKTLLEHYAKILGFSLKEAVKIVFDVAEGNKSLETFGSDVIDWANLAVFFNAWSLASHEPMLPGGEGITGPVVCYWHMMNSLLEKCVLRKVRITGPVVCYPGGDLPVLVQLITESVAWHSLVLQSYVRSSLPCGKKKKKSGHADICSSSLSQGVRDSVLSLYSTVQVVAKWLSEELNKREDDAVDQLLSSLVSCPHEGPGQIFQVLNDSISSANEVELGDRIFQAVKSWSPTDVASKMIKGQRRTLSDLLQICNSKLKLLETLKQQL*

Click here to download the sequence:
Link to NCBI Protein BLAST