Transcript Information: S_Transcript_77175.p1


Annotated TAIR IDAT1G76660.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT5G52430.1); Has 353 Blast hits to 231 proteins in 60 species: Archae - 0; Bacteria - 6; Metazoa - 57; Fungi - 22; Plants - 125; Viruses - 4; Other Eukaryotes - 139 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:28769157-28771036 | Reverse length=431
E-Value7.2E-142
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.469730156258
Replicate 28.2917297018352
Replicate 37.2554939757462
Condition 2: 8 Hour
Replicate 112.514020252032
Replicate 211.554691055683
Replicate 311.571460128418
Condition 3: 24 Hour
Replicate 17.8257494702568
Replicate 27.4715862339607
Replicate 38.4258258232476


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_77175.p1 GENE.S_Transcript_77175~~S_Transcript_77175.p1 ORF type:complete len:455 (+),score=93.07 S_Transcript_77175:244-1608(+)
ATGAGTCAGCGCAAGAAATGGGGAGGATGTTTGGGTGGATTTTCCTGTTTTCGATCACAGAAGGGTGGAAAGCGTATCGTACCAGCATCTCGTACACCAGAAGGCAGCACAGCAGCAAACCAATCTAATGGGCCACAGGGCGTTGGTTTACCGAACCAGGCTACTTCATTAGCCCCTCATCTTCTAGCGCCTCCTTCTTCTCCTGCATCCTTTACGAATTCTGCACTCCCTTCTACTGCTCAATCACCAAGTTGTCTCCTCTCGATGTCTGCCAATTCACCTGGGAATCCTTCCTCAACTATGTTTGCAACTGGACCATATGCTCATGAGACACAACTGGTGACCCCTCCTGTATTTTCAACCTTTACCACTGAGCCTTCAACTGCTCCTTTGACCCCTCCACCAGAGTTGGCTCACCTAACAACCCCCTCTTCTCCTGATGTGCCTTTTGCTCAATTTCTTTCATCCTCAGCAGGTTTAAAATGTGCTGGGAAGACAAATTATGTGGCTTCAAATGATCTGCAAACAACGTATCCTCTTTCACCTGGAAGTCCTGCTAGTAGCCTTATATCACCTGTTTCGAGGACCTCGCGTGACTGTGTTCCTGAGAAGGAGCTCTCTTCTTCATGGGATCCTTCTCTTTCTCCCAAAACTGCTAAATACCCACGAACTGGGTCAGGATGGCTTGCTTCTAATGCCTCCAAGTCTCAAGATGCTAATTTTTTCTGCCCTGCAACTTTTGCTGAATTTTATGTGGACGCACCACATTCTGGTGGAAGGCTAAGTATTTCCAAGGAGCCAGATGTTTACCCTAGTTCTGGAGCTGGAAATCAGTGCAAGCAAAATAAGAATTGCAAACAAGATGTGGAGGAAATTGAAGCATACAGGGCATCCTTTGGCTTTAGTGCCGATGAAATGATCACTAGTGCTCAATATGTGGAAATATCTGATGTAATGGATGACTCTTTTACTATGATGCCGTGCCCCTCTAACAAGCCGCATATAGAAGAAGCTACATTGCTGGGGTGGGGAGGGGGAGGATCGAGGATAAAAAAGTCAGGGACCAATTCACCTGGTGAAAGATCCACTAAATCAGAGTCAGTTAGCAATTGCAAAGTTACACCCAGGATAATTTCATCCAATCAAACTGAGGATGACAACTCAGATTGGCAAGCTGGGGATGTCTCTGGACAGAGTACACCAAGAAACTTTTATTTGACCGATGAAGATGACATATTTTCTGACATGGGGAAGTTGAAAACTAACAGAAAATACCACGTAGGCCTTTCCTGCTCTGATGCAGAGATTGAATATAGACGGGGCAGAAGCTTGCGAGAATGTAGAGGAGATCTCTCATGGCATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_77175.p1 GENE.S_Transcript_77175~~S_Transcript_77175.p1 ORF type:complete len:455 (+),score=93.07 S_Transcript_77175:244-1608(+)
MSQRKKWGGCLGGFSCFRSQKGGKRIVPASRTPEGSTAANQSNGPQGVGLPNQATSLAPHLLAPPSSPASFTNSALPSTAQSPSCLLSMSANSPGNPSSTMFATGPYAHETQLVTPPVFSTFTTEPSTAPLTPPPELAHLTTPSSPDVPFAQFLSSSAGLKCAGKTNYVASNDLQTTYPLSPGSPASSLISPVSRTSRDCVPEKELSSSWDPSLSPKTAKYPRTGSGWLASNASKSQDANFFCPATFAEFYVDAPHSGGRLSISKEPDVYPSSGAGNQCKQNKNCKQDVEEIEAYRASFGFSADEMITSAQYVEISDVMDDSFTMMPCPSNKPHIEEATLLGWGGGGSRIKKSGTNSPGERSTKSESVSNCKVTPRIISSNQTEDDNSDWQAGDVSGQSTPRNFYLTDEDDIFSDMGKLKTNRKYHVGLSCSDAEIEYRRGRSLRECRGDLSWH*

Click here to download the sequence:
Link to NCBI Protein BLAST