Transcript Information: S_Transcript_7728.p1


Annotated TAIR IDAT4G13930.1
Annotated Gene Nameserine hydroxymethyltransferase 4
Annotated Gene Symbol(s)SHM4
Annotation TypeOrtholog
Chromosome Positionchr4:8048013-8050021 | Reverse length=471
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1410.78928560995
Replicate 2380.29922367797
Replicate 3326.68052371613
Condition 2: 8 Hour
Replicate 1160.84205233676
Replicate 2163.26514540389
Replicate 3173.62228076778
Condition 3: 24 Hour
Replicate 1325.42451435253
Replicate 2398.7830963397
Replicate 3369.38240399919


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_7728.p1 GENE.S_Transcript_7728~~S_Transcript_7728.p1 ORF type:complete len:544 (+),score=125.82,SHMT|PF00464.15|2.1e-186 S_Transcript_7728:78-1709(+)
ATGATGATGCAACATATGTCAGTAATAACATACCCTCAAAAAGACATAAAAGCCCTTCATCATCCCTATCCCACAACCAACACCCCTCCTCCTCACCCTTTAAAATCACATCCGCATTTCATCAAACACCTTGTGTGCCCTGCAAAACTCCTCCATTTCTCAACCTTTTTCAAATCCAACAAAAACCCACTTCCAATCTCCTCCCATTCACCCACAATGGAACCCGTCACAGCCTGGGGAAACACCTCCTTGGAGCAAGTCGACCCAGAAATCCATGATCTTATAGAGAAAGAAAAGCGCCGTCAATGTAGAGGAATTGAGCTCATAGCCTCAGAAAACTTCACATCATTTGCAGTGATTGAAGCCTTAGGAAGTGCCCTCACAAACAAATACTCAGAGGGTATGCCAGGAAACAGATACTATGGTGGGAATGAATTCATTGATGAGATTGAGAATCTTTGCCGCTCAAGAGCCCTTGAATGTTACCGTTTAGACCCATCAAAATGGGGTGTTAATGTACAGCCATACAGTGGTAGCCCAGCAAACTTTGCAGCTTATACAGCTGTGTTGAACCCGCATGATAGGATCATGGGTTTGGATCTGCCATCGGGTGGGCATTTGACACATGGGTATTACACATCTGGGGGGAAAAAGATTAGTGCAACTTCGATTTACTTTGAGAGTTTGCCTTACAAGGTGAATTCTGAAACTGGGTATATTGATTATGATAAGCTTGAGGAGAAAGCTATGGACTTTAGGCCTAAGATGATTATTTGCGGGGGGAGTGCTTATCCTAGGGATTGGGATTATGCTAGGTTTAGAGCTGTTGCTGATAAGTGTGGGGCCCTCTTGCTTTGTGATATGGCTCACATTAGTGGCCTTGTTGCTGCTCAGGAAGCTGCAAGCCCCTTTGATTACTGTGACATTGTCACTACCACCACTCACAAGAGTCTTAGGGGCCCAAGGGCTGGCATGATCTTCTACCGCAAGGGCCCAAAACCGCCAAAGAAGGGCCAACCCGAAGGTGCTGTGTACGACTTTGAAGACCGCATCAACTTTGCTGTTTTCCCTTCCCTCCAAGGTGGTCCTCACAACCACCAAATCGGGGCCTTGGCTGTTGCCCTGAAACAGGCCAATTCTCCTGGCTTCAAGGCTTATGCAAAGCAGGTTAGGGCTAATGCTGTTGCCATTGGCAAGTACTTGATGGGCAAAGGATACAGTCTAGTTACCGGTGGTACTGAGAACCACCTTGTTCTCTGGGATCTTCGCCCTCTTGGATTGACAGGAAACAAGGTGGAGAAGCTCTGCGACTTGTGCAGCATTACAGTCAACAAGAATGCCGTCTTTGGTGACAGCAGTGCCTTGGCTCCTGGAGGTGTAAGAATTGGTACTCCTGCCATGACTTCAAGAGGGTTAGTGGAGAAGGACTTTGAGCAAATAGGTGAGTTCCTCCACAGAGCTGTGACAATCACCTTGAACATCCAGAAGGAGTATGGAAAACTCCTCAAGGACTTCAACAAAGGTTTGGTTAACAACAAGGAGATCGAAGAACTCAAGGCCGATGTCGAGAAGTTTGCATCTTCCTTTGACATGCCTGGCTTCTCCATGGCTGACATGAAGTACAAGGATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_7728.p1 GENE.S_Transcript_7728~~S_Transcript_7728.p1 ORF type:complete len:544 (+),score=125.82,SHMT|PF00464.15|2.1e-186 S_Transcript_7728:78-1709(+)
MMMQHMSVITYPQKDIKALHHPYPTTNTPPPHPLKSHPHFIKHLVCPAKLLHFSTFFKSNKNPLPISSHSPTMEPVTAWGNTSLEQVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALECYRLDPSKWGVNVQPYSGSPANFAAYTAVLNPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSETGYIDYDKLEEKAMDFRPKMIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAASPFDYCDIVTTTTHKSLRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDRINFAVFPSLQGGPHNHQIGALAVALKQANSPGFKAYAKQVRANAVAIGKYLMGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCSITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLVEKDFEQIGEFLHRAVTITLNIQKEYGKLLKDFNKGLVNNKEIEELKADVEKFASSFDMPGFSMADMKYKD*

Click here to download the sequence:
Link to NCBI Protein BLAST