Transcript Information: S_Transcript_77301.p1


Annotated TAIR IDAT1G62040.2
Annotated Gene NameUbiquitin-like superfamily protein
Annotated Gene Symbol(s)ATG8C
Annotation TypeOrtholog
Chromosome Positionchr1:22932782-22934253 | Forward length=133
E-Value6.3E-71
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 172.446503362436
Replicate 264.962658141571
Replicate 367.330623797272
Condition 2: 8 Hour
Replicate 1112.5506711182
Replicate 2102.98152548446
Replicate 3104.887504088
Condition 3: 24 Hour
Replicate 178.017441037836
Replicate 272.128479699328
Replicate 370.061234458656


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_77301.p1 GENE.S_Transcript_77301~~S_Transcript_77301.p1 ORF type:5prime_partial len:126 (+),score=30.27,Atg8|PF02991.12|1.5e-50,APG12|PF04110.9|1.2e-06 S_Transcript_77301:1-378(+)
GACAATATGGCCAAAAGCTCCTTCAAATCGGAACACCCTCTTGAGAAAAGACAAGCAGAAGCTGCTCGTATCAGAGAGAAGTTTCCTGATAGAATTCCTGTGATTGTGGAGAAAGCTCCAAGGACCGACATTCCTGACATCGATAAGAAGAAATACCTTGTGCCAGCCGATTTGACTGTTGGGCAGTTTGTCTATGTGGTAAGGAAGAGAGTGAATCTCAGTGCTGAGAAGGCTATATTTGTGTTTGTCAAAAATACTTTACCTCCCACTGCTGCCCTGATGTCGAATGTCTACGAGGAAAACAAGGATGAAGACGGCTTTCTTTACATGACTTACAGCGGAGAGAATGTGTTTGGATCGACCTGTGGTGATAACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_77301.p1 GENE.S_Transcript_77301~~S_Transcript_77301.p1 ORF type:5prime_partial len:126 (+),score=30.27,Atg8|PF02991.12|1.5e-50,APG12|PF04110.9|1.2e-06 S_Transcript_77301:1-378(+)
DNMAKSSFKSEHPLEKRQAEAARIREKFPDRIPVIVEKAPRTDIPDIDKKKYLVPADLTVGQFVYVVRKRVNLSAEKAIFVFVKNTLPPTAALMSNVYEENKDEDGFLYMTYSGENVFGSTCGDN*

Click here to download the sequence:
Link to NCBI Protein BLAST