Transcript Information: S_Transcript_77538.p1


Annotated TAIR IDAT5G13970.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13310.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:4506383-4507804 | Reverse length=404
E-Value2E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.5480533097513
Replicate 22.5348736938421
Replicate 32.7467904805363
Condition 2: 8 Hour
Replicate 13.4483609874513
Replicate 23.0939790671962
Replicate 32.2676433622321
Condition 3: 24 Hour
Replicate 13.1605363348094
Replicate 22.845031665967
Replicate 32.3075487434468


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_77538.p1 GENE.S_Transcript_77538~~S_Transcript_77538.p1 ORF type:complete len:470 (+),score=114.82,TSSC4|PF15264.2|2.4e-08,TSSC4|PF15264.2|5.1e+03 S_Transcript_77538:99-1508(+)
ATGGACGACACTTTCAGGGTTCGAGTTGACAGAGTCTTCGGTTCTCTCTCCTCCACCTCATTATCTTCTTCTTCATCCTCTTCGCAACCTCTGAGCTCATCCTTATGGTCTCTCACCGACGAGGAGATCGAGAAGAAGTCTTGGACCCGAGATTCTTTCTCCTCCTCTTTCGACGGTCAAGGCCAAACTAATAACGACGGCACCGACGACGACGATGACGAAGGTCCTTTTCCTACTAGCGTCGACCGTCTTCTCTCAGCTATGAAGGATAAATTACCTATTGACGACGACTCTCCAAACCTTAACCCTAACCCTAGCACCAGCGCTAGTGATTTTAGGAAGGAGTTTGAGGATGATCTTGAGGAACTCGATGACGACGATGCCGGCGAAGGGACTAGTGGCGGAGAAGGTACTACGACGTCGTCCAATGGTCCATCACATGAGACGTTCGACGGTGATGAGGATGAATTGGAGATTAAGAATTCTATTGGCATGGATTGTACTCTTGATTTCGAGGTAGAAGAGGATGAAATCGATAAGCTGGCTGTTGGCGAAGAAAACACTGGTGATCGTCTGTACATGTCTGGTGTAACTGATTACTTACCTGGTTTTAACTCCTACAATGAAATTCCCAACTCATTTGGAGAAGCCTTTAGAGACCCACGTGCCAACCATTTAGCTGCAAAGCTTAGGCTGAAAGAAGATGCAGAGACGGCTCGAAGTTTTAACTCTTTGCATGTTTCTGAGCCAACTGAAGTTGTTTCTGTTTCTCAAAATAATGTTTCTGAAGATGGAAATAACCCAAAGTCAATATTGAAGAGAAAAGAGGATCAGATGGGTTCAAAGTCTGAAAAACGTGTCCGGTTTGAGTCGAGCTGCAAAAAAAGTGATGAAAGGGGGTCTGAAGGAGATAAAAATGCCTCAGCAGGGGCTTTTAATGGAAAGAACACTTTGCAGAAGGAAGCAGCTTCTCAGACTCAAGATTCTGTACCAGATTATATATGCAATCCTTCAAAGTATACCCACTATACATTTGATTCATCTAGTGACATGAATGAAGCATCTAACCGCCAGGCGTATGCTGACTTCCTTAGTATGCTCAAAAAGTCGAAGCAGTTGGACGCAGATGAAGTTCCTGCTGATCTGTCAAAACCTGTTATATTCAATCCAAAGAGGAAAACTGGGCAGGACTTGACATCGATGACCAGCAATGAGAATAATCAGACTGAGGATATGGCCGTGCAGTCATCTGTGCAGAGGAAAAGCTTGCCTGTAAGTTTTGCATCCGAGGAGATGCAAGGAGATGAAACATGTGAAATGGAGGTAGAAGAGCAAGTAACTGTAGGCATGAAGGTTAATGAACGGAGAACAGCTCGTAAATATCGCTCCAAACAGGCTTTGGAGTCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_77538.p1 GENE.S_Transcript_77538~~S_Transcript_77538.p1 ORF type:complete len:470 (+),score=114.82,TSSC4|PF15264.2|2.4e-08,TSSC4|PF15264.2|5.1e+03 S_Transcript_77538:99-1508(+)
MDDTFRVRVDRVFGSLSSTSLSSSSSSSQPLSSSLWSLTDEEIEKKSWTRDSFSSSFDGQGQTNNDGTDDDDDEGPFPTSVDRLLSAMKDKLPIDDDSPNLNPNPSTSASDFRKEFEDDLEELDDDDAGEGTSGGEGTTTSSNGPSHETFDGDEDELEIKNSIGMDCTLDFEVEEDEIDKLAVGEENTGDRLYMSGVTDYLPGFNSYNEIPNSFGEAFRDPRANHLAAKLRLKEDAETARSFNSLHVSEPTEVVSVSQNNVSEDGNNPKSILKRKEDQMGSKSEKRVRFESSCKKSDERGSEGDKNASAGAFNGKNTLQKEAASQTQDSVPDYICNPSKYTHYTFDSSSDMNEASNRQAYADFLSMLKKSKQLDADEVPADLSKPVIFNPKRKTGQDLTSMTSNENNQTEDMAVQSSVQRKSLPVSFASEEMQGDETCEMEVEEQVTVGMKVNERRTARKYRSKQALES*

Click here to download the sequence:
Link to NCBI Protein BLAST