Transcript Information: S_Transcript_77542.p1


Annotated TAIR IDAT5G13970.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13310.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:4506383-4507804 | Reverse length=404
E-Value6.6E-46
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.7531155588075
Replicate 23.7714170183786
Replicate 34.1772009078241
Condition 2: 8 Hour
Replicate 14.9212439193384
Replicate 24.8281126337871
Replicate 34.3269348770795
Condition 3: 24 Hour
Replicate 15.7412834815023
Replicate 25.0848295203343
Replicate 35.6048987566925


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_77542.p1 GENE.S_Transcript_77542~~S_Transcript_77542.p1 ORF type:complete len:468 (+),score=115.22,TSSC4|PF15264.2|7.6e-08 S_Transcript_77542:88-1491(+)
ATGACACTTTCAGGGTTCGAGCTGACAGTCTTCGGTTCTCTCTCCTCCACCTCATTATCTTCTTCTTCATCCTCTTCGCAACCTCTGAGCTCATCCTTATGGTCTCTCACCGACGAGGAGATCGAGAAGAAGTCTTGGACCCGAGATTCTTTCTCCTCCTCTTTCGACGGTCAAGGCCAAACTAATAACGACGGCACCGACGACGACGATGACGAAGGTCCTTTTCCTACTAGCGTCGACCGTCTTCTCTCAGCTATGAAGGATAAATTACCTATTGACAACGACTCTCCAAACCCTAACCCTAACCCTAGCTCTAGCGCTGGTGATTTTCGGAAGGAGCTTGAGGATGATCTTGAGGAACTCGATGACGACGATGCCGGCGAAGGGACTAGTGGAGGAAAAGGTACTACGACGTCGTCCAGTGGTCCATCACGTGAGGCGTTCGACGGTGATGAGGATGAATTGGAGATTAAGAATTCTATTGGCATGGATTGTACTCTTGATTTCGAGGTAGAAGAGGATGAAATCGATAAGCTGGCTGTTGGCGAAGAAAACACTGGTGATCGTCTGTACATGTCTGGTGTAACTGATTACTTACCTGGTTTTAACTCCTACAATGAAATTCCCAACTCATTTGGAGAAGCCTTTAGAGACCCACGTGCCAACCATTTAGCTGCAAAGCTTAGGCTGAAAGAAGATGCAGAGACGGCTCGAAGTTTTAACTCTTTGCATGTTTCTGAGCCAACTGAAGTTGTTTCTGTTTCTCAAAATAATGTTTCTGAAGATGGAAATAACCCAAAGTCAATATTGAAGAGAAAAGAGGATCAGATGGGTTCAAAGTCTGAAAAACGTGTCCGGTTTGAGTCGAGCTGCAAAAAAAGTGATGAAAGGGGGTCTGAAGGAGATAAAAATGCCTCAGCAGGGGCTTTTAATGGAAAGAACACTTTGCAGAAGGAAGCAGCTTCTCAGAACCAAGATTTTGTACCAGATTATATACGCAATCCTTCAAAGTATACACACTACACATTTGATTCATCCAGTGATATGAATGAAGCATCTAACCGCCAGGCGTATGCAGACTTCCTTAGTATGCTAAAAAAGTCGAAGCAGTCAGACCCAGATGAAGTTCCTGCTGATCTGTCAAAACCTGTTATATTCAATCCAAAGAGGAAAACTGGGCAGGACTTGACGTTGACGACCAGCAATGAGAATGATCAGAGCGAGGATATGGTCGTGCAGTCATCTGTGCAGAGGAAAAGCTTGCCTGTAAGTTTTGCATCCGAGGAGATGCAAGGAGATGAAACATGTGAAATGGAGGTAGAAGAGCAAGTAACTGTAGGCATGAAGGTTAATGAACGGAGAACAGCTCGTAAATATCGCTCCAAACAGGCTTTGGAGTCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_77542.p1 GENE.S_Transcript_77542~~S_Transcript_77542.p1 ORF type:complete len:468 (+),score=115.22,TSSC4|PF15264.2|7.6e-08 S_Transcript_77542:88-1491(+)
MTLSGFELTVFGSLSSTSLSSSSSSSQPLSSSLWSLTDEEIEKKSWTRDSFSSSFDGQGQTNNDGTDDDDDEGPFPTSVDRLLSAMKDKLPIDNDSPNPNPNPSSSAGDFRKELEDDLEELDDDDAGEGTSGGKGTTTSSSGPSREAFDGDEDELEIKNSIGMDCTLDFEVEEDEIDKLAVGEENTGDRLYMSGVTDYLPGFNSYNEIPNSFGEAFRDPRANHLAAKLRLKEDAETARSFNSLHVSEPTEVVSVSQNNVSEDGNNPKSILKRKEDQMGSKSEKRVRFESSCKKSDERGSEGDKNASAGAFNGKNTLQKEAASQNQDFVPDYIRNPSKYTHYTFDSSSDMNEASNRQAYADFLSMLKKSKQSDPDEVPADLSKPVIFNPKRKTGQDLTLTTSNENDQSEDMVVQSSVQRKSLPVSFASEEMQGDETCEMEVEEQVTVGMKVNERRTARKYRSKQALES*

Click here to download the sequence:
Link to NCBI Protein BLAST