Transcript Information: S_Transcript_77607.p1


Annotated TAIR IDAT3G45300.1
Annotated Gene Nameisovaleryl-CoA-dehydrogenase
Annotated Gene Symbol(s)IVD, ATIVD, IVDH
Annotation TypeOrtholog
Chromosome Positionchr3:16621659-16624848 | Reverse length=409
E-Value2.2E-231
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.6158969069539
Replicate 26.7747152717369
Replicate 36.0640518100969
Condition 2: 8 Hour
Replicate 112.690925215902
Replicate 212.948923261581
Replicate 310.368306307858
Condition 3: 24 Hour
Replicate 18.1918313089728
Replicate 27.0208546731076
Replicate 35.4145149674026


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_77607.p1 GENE.S_Transcript_77607~~S_Transcript_77607.p1 ORF type:3prime_partial len:368 (+),score=77.58,Acyl-CoA_dh_N|PF02771.12|3.2e-35,Acyl-CoA_dh_M|PF02770.15|8.9e-26,Acyl-CoA_dh_1|PF00441.20|2.1e-24,Acyl-CoA_dh_2|PF08028.7|8.3e-06 S_Transcript_77607:184-1284(+)
ATGTTTCAAAGGGTTTTTGCAATTGCAGTGAGAAGGAGTAAATGTGGTTGTGTATTCAGAAATCAAACAACAACACAGCGTGCTTGTTTCTCTACTTCTTCTTTACTCTTCGATGATACTCAGTTACAGTTTAAAGAAAGTGTAGCTCAATTTGCACAAGAAAATATTGCTCCTCATGCAGAAAAAATAGACAAAACAAACTATTTCCCAAAGGATGTAAACCTATGGAAACTCATGGGAGACTTTAATCTTCATGGAATTACAGCACCAGAGGAATATGGAGGGCTTGGTCTTGGTTATCTGTACCACTGCATTGCAATGGAGGAAATTAGTCGTGCTTCAGGATCAGTTGGGCTTTCATACGGAGCTCATTCTAATCTTTGCCTTAATCAGCTGGTGAGGAATGGAAACCCAGCTCAGAAAGAGAAATATTTGCCTAAGCTTATCAGTGGGGAGCATGTCGGAGCTTTGGCGATGAGTGAACCAAACGCTGGTTCAGATGTTGTTAGCATGAAATGTAGAGCTGATCGTGTTGATGGGGGTTACATTCTAAATGGAAACAAAATGTGGTGCACGAATGGTCCCATTGCACAAACACTGATTGTTTATGCAAAAACAGATATAATGGCTCACTCCAAGGGGATCACTGCCTTCATCATCGAGAAAGGGATGCCTGGATTCAGCACTGCTCAGAAACTAGACAAGCTGGGGATGCGAGGAAGTGACACGTGCGAACTTGTTTTTGAGAATTGCTTTGTGCCCGAGGAAAATGTTCTTGGGAAAGAAGGGAAAGGGGTCTATGTTATGATGTCTGGACTAGATTTGGAGAGGCTTGTCTTGTCAGCAGGTCCTCTTGGTATTATGCAATCTTGCCTTGATGTTGTTCTTCCTTATATTCGACAGAGGGAGCAATTTGGACGTCCAATCGGTGAATTCCAGTTCATACAGGGGAAGGTTGCTGACATGTATACTTCCCTGCAGTCTTCAAGGTCATATGTGTACTCTGTTGCTAGAGACTGTGATAGCGGAAAAGTTGACCCAAAGGATTGTGCTGCAGTTATACTTTGTGCTGCTGAAAGAGCTACACAAGTTGCATTACAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_77607.p1 GENE.S_Transcript_77607~~S_Transcript_77607.p1 ORF type:3prime_partial len:368 (+),score=77.58,Acyl-CoA_dh_N|PF02771.12|3.2e-35,Acyl-CoA_dh_M|PF02770.15|8.9e-26,Acyl-CoA_dh_1|PF00441.20|2.1e-24,Acyl-CoA_dh_2|PF08028.7|8.3e-06 S_Transcript_77607:184-1284(+)
MFQRVFAIAVRRSKCGCVFRNQTTTQRACFSTSSLLFDDTQLQFKESVAQFAQENIAPHAEKIDKTNYFPKDVNLWKLMGDFNLHGITAPEEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCLNQLVRNGNPAQKEKYLPKLISGEHVGALAMSEPNAGSDVVSMKCRADRVDGGYILNGNKMWCTNGPIAQTLIVYAKTDIMAHSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPEENVLGKEGKGVYVMMSGLDLERLVLSAGPLGIMQSCLDVVLPYIRQREQFGRPIGEFQFIQGKVADMYTSLQSSRSYVYSVARDCDSGKVDPKDCAAVILCAAERATQVALQ

Click here to download the sequence:
Link to NCBI Protein BLAST